RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TRIM6Q9C030 488 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 KCTD10Q9H3F6 313 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 RC3H2Q9HBD1 1191 aaKnown RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 C1orf112Q9NSG2 853 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 GEMIN8Q9NWZ8 242 aaKnown RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 MIOSQ9NXC5 875 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 YBX2Q9Y2T7 364 aaKnown RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 V9GYY5 206 aaPredicted RBP10.73□□□□□ -0.69
CCDC171-203ENST00000449575 COL6A3P12111 3177 aa10.73□□□□□ -0.69
CCDC171-203ENST00000449575 GOLGA8IPA6NC78 632 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 GOLGA8JA6NMD2 632 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 CLDN3O15551 220 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF623O75123 536 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 DGKIO75912 1065 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 SMC2O95347 1197 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 H2AFXP16104 143 aaPredicted RBP10.72□□□□□ -0.69
CCDC171-203ENST00000449575 MATR3P43243 847 aaKnown RBP eCLIP10.72□□□□□ -0.69
CCDC171-203ENST00000449575 ACOT2P49753 483 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PMS1P54277 932 aaKnown RBP10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PSMD2Q13200 908 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 MORC3Q14149 939 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 BMT2Q1RMZ1 405 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 MRPL10Q7Z7H8 261 aaKnown RBP10.72□□□□□ -0.69
CCDC171-203ENST00000449575 SAAL1Q96ER3 474 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 CCDC34Q96HJ3 373 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PBX4Q9BYU1 374 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 CBX8Q9HC52 389 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 TMEM161AQ9NX61 479 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 HOOK1Q9UJC3 728 aaKnown RBP10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PLAGL2Q9UPG8 496 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PCDHB7Q9Y5E2 793 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 A0A0B4J269 797 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 TRIM49BA6NDI0 452 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 B4GALT3O60512 393 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 EFCAB14O75071 495 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 WNT7BP56706 349 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 MCL1Q07820 350 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 KNOP1Q1ED39 458 aaKnown RBP10.72□□□□□ -0.69
CCDC171-203ENST00000449575 SLC17A8Q8NDX2 589 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 HVCN1Q96D96 273 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 FAM84AQ96KN4 292 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 SLC9A7Q96T83 725 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 GAD1Q99259 594 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PLCD4Q9BRC7 762 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 SEMA6BQ9H3T3 888 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 INPP5FQ9Y2H2 1132 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 PLXNA4Q9HCM2 1894 aa10.72□□□□□ -0.69
CCDC171-203ENST00000449575 RECQL4O94761 1208 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 MLH1P40692 756 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 CRELD2Q6UXH1 353 aaPredicted RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 LRRC55Q6ZSA7 311 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 LUZP1Q86V48 1076 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 NPAS4Q8IUM7 802 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 LRRC8AQ8IWT6 810 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 CACTINQ8WUQ7 758 aaKnown RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 POMGNT1Q8WZA1 660 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 ZNF689Q96CS4 500 aaPredicted RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 CASD1Q96PB1 797 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 ADPGKQ9BRR6 497 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 ZBED2Q9BTP6 218 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 MSTO1Q9BUK6 570 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 AGPAT3Q9NRZ7 376 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 PARP2Q9UGN5 583 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 LRFN2Q9ULH4 789 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 STYXL1Q9Y6J8 313 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 XIRP2A4UGR9 3374 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 PPP1R3GB7ZBB8 358 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 TLL1O43897 1013 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 HTRA4P83105 476 aaPredicted RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 SPAG1Q07617 926 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 ALCAMQ13740 583 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 DPCR1Q3MIW9 517 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 GLRA4Q5JXX5 417 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 KLHL10Q6JEL2 608 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 RBM43Q6ZSC3 357 aaKnown RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 GOLGA6L1Q8N7Z2 621 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 NOC3LQ8WTT2 800 aaKnown RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 CCDC51Q96ER9 411 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 MTIF3Q9H2K0 278 aaKnown RBP10.71□□□□□ -0.69
CCDC171-203ENST00000449575 RMND1Q9NWS8 449 aa10.71□□□□□ -0.69
CCDC171-203ENST00000449575 ATG2AQ2TAZ0 1938 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 SCN1AP35498 2009 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 ARL5CA6NH57 179 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 TBKBP1A7MCY6 615 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 EOMESO95936 686 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 POMCP01189 267 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 CA3P07451 260 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 TPM1P09493 284 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 STAG3L1P0CL83 205 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 CXCL8P10145 99 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 MCF2P10911 925 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 ITGA4P13612 1032 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 PBX3P40426 434 aa10.71□□□□□ -0.7
CCDC171-203ENST00000449575 MAPK8IP2Q13387 824 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms