RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 APOBEC3FQ8IUX4 373 aaKnown RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 MSL3Q8N5Y2 521 aaKnown RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 ATP8B4Q8TF62 1192 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 C1orf54Q8WWF1 131 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 CYFIP2Q96F07 1278 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 MFSD14AQ96MC6 490 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 FAM107BQ9H098 131 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 INTUQ9ULD6 942 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 PHIPQ8WWQ0 1821 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 CLDN3O15551 220 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 PDE6CP51160 858 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 ALDH5A1P51649 535 aaPredicted RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 POU5F1Q01860 360 aaKnown RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 ALCAMQ13740 583 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 MIS18BP1Q6P0N0 1132 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 PRELID2Q8N945 189 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 FNBP1Q96RU3 617 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 HOXC10Q9NYD6 342 aa15.89■□□□□ 0.13
SF1-211ENST00000448404 CNOT8Q9UFF9 292 aaKnown RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 AGO2Q9UKV8 859 aaKnown RBP15.89■□□□□ 0.13
SF1-211ENST00000448404 K7ERI5 159 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 RTN2O75298 545 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 GGPS1O95749 300 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 OATP04181 439 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 CCDC172P0C7W6 258 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 CD58P19256 250 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 PIK3CAP42336 1068 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 IRAK1P51617 712 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 ORC1Q13415 861 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 TTLL12Q14166 644 aaPredicted RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 MYBPC2Q14324 1141 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 GNPTABQ3T906 1256 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 TMEM270Q6UE05 265 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 SAMD3Q8N6K7 520 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 CEP120Q8N960 986 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 DEPTORQ8TB45 409 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 NTPCRQ9BSD7 190 aaKnown RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 HEMGNQ9BXL5 484 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 WDR81Q562E7 1941 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 CST3P01034 146 aaPredicted RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 TCF7P36402 384 aaPredicted RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 VPS41P49754 854 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 GPC3P51654 580 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 DR1Q01658 176 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 XKR3Q5GH77 459 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 FBXO16Q8IX29 292 aaPredicted RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 ACSF2Q96CM8 615 aaPredicted RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 FBXL18Q96ME1 805 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 ZSWIM1Q9BR11 485 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 C11orf70Q9BRQ4 267 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 PSD3Q9NYI0 1048 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 MAP3K20Q9NYL2 800 aaKnown RBP15.88■□□□□ 0.13
SF1-211ENST00000448404 ANAPC7Q9UJX3 599 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 PARP14Q460N5 1801 aa15.88■□□□□ 0.13
SF1-211ENST00000448404 MYH9P35579 1960 aaKnown RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 C19orf81C9J6K1 198 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 SHBGP04278 402 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 CTNNA1P35221 906 aaKnown RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 SEC24CP53992 1094 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 CDR2Q01850 454 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 CAPSQ13938 189 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 SCARA5Q6ZMJ2 495 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 PRPF31Q8WWY3 499 aaKnown RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 MAGOHBQ96A72 148 aaKnown RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 C12orf42Q96LP6 360 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 PWWP2AQ96N64 755 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 MSTO1Q9BUK6 570 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 PDGFCQ9NRA1 345 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 RBAKQ9NYW8 714 aaPredicted RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 DOCK1Q14185 1865 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 FARP2O94887 1054 aaPredicted RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 TCF4P15884 667 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 TNFRSF8P28908 595 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 PSMC4P43686 418 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 CCT5P48643 541 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 PEX5P50542 639 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 CDR1P51861 262 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 MCPH1Q8NEM0 835 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 FBXO25Q8TCJ0 367 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 SPIRE2Q8WWL2 714 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 USTQ9Y2C2 406 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 NUB1Q9Y5A7 615 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 GRIN2DO15399 1336 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 FOXO6A8MYZ6 492 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 BRDTQ58F21 947 aaPredicted RBP15.87■□□□□ 0.13
SF1-211ENST00000448404 LBX2Q6XYB7 198 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 IWS1Q96ST2 819 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 CAPS2Q9BXY5 557 aa15.87■□□□□ 0.13
SF1-211ENST00000448404 B4GALT5O43286 388 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 TMOD1P28289 359 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 IGBP1P78318 339 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 ZNF844Q08AG5 666 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 STRN3Q13033 797 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 ANKS1BQ7Z6G8 1248 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 JAMLQ86YT9 394 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 TEX2Q8IWB9 1127 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 SLC7A3Q8WY07 619 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 SENP7Q9BQF6 1050 aa15.86■□□□□ 0.13
SF1-211ENST00000448404 SPATC1LQ9H0A9 340 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms