RNA–Protein interactions for RNA: ENST00000446716.5

ATG9A-215, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 5,245 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-215ENST00000446716 POLR3CQ9BUI4 534 aaPredicted RBP18.87■□□□□ 0.61
ATG9A-215ENST00000446716 CLTAP09496 248 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 OCRLQ01968 901 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 STK33Q9BYT3 514 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 RTN2O75298 545 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 HLA-DRAP01903 254 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 CDR2LQ86X02 465 aaPredicted RBP18.87■□□□□ 0.61
ATG9A-215ENST00000446716 CATSPER3Q86XQ3 398 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 SPATS2Q86XZ4 545 aaKnown RBP18.87■□□□□ 0.61
ATG9A-215ENST00000446716 PGBD3Q8N328 593 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 KAZALD1Q96I82 304 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 GMCL1Q96IK5 515 aa18.87■□□□□ 0.61
ATG9A-215ENST00000446716 COPEO14579 308 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ADCY2Q08462 1091 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 C6orf118Q5T5N4 469 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 PARD6BQ9BYG5 372 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 UNC45AQ9H3U1 944 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 MANSC4A6NHS7 340 aaPredicted RBP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 APOL1O14791 398 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 CAV1Q03135 178 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 DPYDQ12882 1025 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 GLE1Q53GS7 698 aaKnown RBP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 TAS2R42Q7RTR8 314 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 TAF6LQ9Y6J9 622 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 GPR182O15218 404 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 IL1RL1Q01638 556 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 GPS1Q13098 491 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ZNF484Q5JVG2 852 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ATG16L1Q676U5 607 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ZC3H18Q86VM9 953 aaKnown RBP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 HVCN1Q96D96 273 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 VPS11Q9H270 941 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 TUBE1Q9UJT0 475 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 PITPNM2Q9BZ72 1349 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 SPATA31D1Q6ZQQ2 1576 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 PREX1Q8TCU6 1659 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 PI4K2BG5E9Z4 385 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 EIF3DO15371 548 aaKnown RBP eCLIP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 EXTL3O43909 919 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ALDH1A3P47895 512 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ATN1P54259 1190 aaPredicted RBP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 NOP14P78316 857 aaKnown RBP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 ZSCAN26Q16670 478 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 USP49Q70CQ1 688 aa18.86■□□□□ 0.61
ATG9A-215ENST00000446716 CNOT10Q9H9A5 744 aaKnown RBP18.86■□□□□ 0.61
ATG9A-215ENST00000446716 TTC36A6NLP5 189 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 HSPA4LO95757 839 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 BFSP2Q13515 415 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 EMBQ6PCB8 327 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 TTC8Q8TAM2 541 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 SH3BP1Q9Y3L3 701 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 PDHXO00330 501 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 CXCL11O14625 94 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 C3orf67Q6ZVT6 689 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 RNF217Q8TC41 542 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 ULK4Q96C45 1275 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 C17orf75Q9HAS0 396 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 ZDHHC9Q9Y397 364 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 BCL9O00512 1426 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 NNTQ13423 1086 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 WNT10BO00744 389 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 CYP2C19P33261 490 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 TAF6P49848 677 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 SNRPFP62306 86 aaKnown RBP18.85■□□□□ 0.61
ATG9A-215ENST00000446716 SLITRK1Q96PX8 696 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 TACO1Q9BSH4 297 aaKnown RBP18.85■□□□□ 0.61
ATG9A-215ENST00000446716 COLEC11Q9BWP8 271 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 SPATC1LQ9H0A9 340 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 VPS33BQ9H267 617 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 STARD7Q9NQZ5 370 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 SLC13A4Q9UKG4 626 aa18.85■□□□□ 0.61
ATG9A-215ENST00000446716 GSTA4O15217 222 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 HSPA8P11142 646 aaKnown RBP18.84■□□□□ 0.61
ATG9A-215ENST00000446716 HERVK_113P62684 666 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 SAMD3Q8N6K7 520 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 GMCL1P1Q8NEA9 526 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 SLC30A5Q8TAD4 765 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 CAPN11Q9UMQ6 739 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 UBQLN1Q9UMX0 589 aaKnown RBP18.84■□□□□ 0.61
ATG9A-215ENST00000446716 UBA6A0AVT1 1052 aaPredicted RBP18.84■□□□□ 0.61
ATG9A-215ENST00000446716 C2CD2LO14523 706 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 FDPSP14324 419 aaKnown RBP18.84■□□□□ 0.61
ATG9A-215ENST00000446716 PNPLA4P41247 253 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 SH3KBP1Q96B97 665 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 GNGT2O14610 69 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 NCK2O43639 380 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 CHRNA3P32297 505 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 CLCN3P51790 818 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 DAGLBQ8NCG7 672 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 CPA5Q8WXQ8 436 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 HPDLQ96IR7 371 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 ATP8B1O43520 1251 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 SUPT20HL2P0C7V6 817 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 NCF2P19878 526 aaPredicted RBP18.84■□□□□ 0.61
ATG9A-215ENST00000446716 ALS2CLQ60I27 953 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 PPM1NQ8N819 430 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 KIFC3Q9BVG8 833 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 NIF3L1Q9GZT8 377 aa18.84■□□□□ 0.61
ATG9A-215ENST00000446716 TMEM8AQ9HCN3 771 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms