RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GYG2O15488 501 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 RPS6KA5O75582 802 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 GYS1P13807 737 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 PTENP60484 403 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 PSMC1P62191 440 aaKnown RBP17.65■□□□□ 0.42
TCOF1-206ENST00000445265 LMBRD2Q68DH5 695 aaPredicted RBP17.65■□□□□ 0.42
TCOF1-206ENST00000445265 BTNL9Q6UXG8 535 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 SULF1Q8IWU6 871 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 C9orf72Q96LT7 481 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 C2orf40Q9H1Z8 148 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 ACAD9Q9H845 621 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 PEX19P40855 299 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 GPC3P51654 580 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 KYNUQ16719 465 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 DUOXA2Q1HG44 320 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 RAB3IL1Q8TBN0 382 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 SERPINB12Q96P63 405 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 SENP7Q9BQF6 1050 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 Q9H521 79 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 HAUS5O94927 633 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 RARGP13631 454 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 ERVK-9P63128 1117 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 HIF1AQ16665 826 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 C15orf52Q6ZUT6 534 aaKnown RBP17.65■□□□□ 0.42
TCOF1-206ENST00000445265 MDM1Q8TC05 714 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 BAP1Q92560 729 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 EPHB6O15197 1021 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 BZW1Q7L1Q6 419 aaKnown RBP17.65■□□□□ 0.42
TCOF1-206ENST00000445265 CRLF3Q8IUI8 442 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 FBXO25Q8TCJ0 367 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 SLC38A10Q9HBR0 1119 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 SLC40A1Q9NP59 571 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF277Q9NRM2 450 aaPredicted RBP17.65■□□□□ 0.42
TCOF1-206ENST00000445265 STOML1Q9UBI4 398 aa17.65■□□□□ 0.42
TCOF1-206ENST00000445265 CNGA1P29973 690 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 TMPRSS15P98073 1019 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 P3H1Q32P28 736 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF568Q3ZCX4 644 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 HP1BP3Q5SSJ5 553 aaPredicted RBP17.64■□□□□ 0.42
TCOF1-206ENST00000445265 ACAD10Q6JQN1 1059 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 C17orf75Q9HAS0 396 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 ZNF70Q9UC06 446 aaPredicted RBP17.64■□□□□ 0.42
TCOF1-206ENST00000445265 ANGPTL2Q9UKU9 493 aa17.64■□□□□ 0.42
TCOF1-206ENST00000445265 FAM153BP0C7A2 387 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 CDR2Q01850 454 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 FAM153CQ494X1 144 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 RIBC1Q8N443 379 aaPredicted RBP17.64■□□□□ 0.41
TCOF1-206ENST00000445265 TSEN2Q8NCE0 465 aaKnown RBP17.64■□□□□ 0.41
TCOF1-206ENST00000445265 FAM153AQ9UHL3 310 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 FAM47DPA6NHR8 397 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 SPAG7O75391 227 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 CRCPO75575 148 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 TOM1L1O75674 476 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 MARK3P27448 753 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 EFNA5P52803 228 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 CCNYQ8ND76 341 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 NSMCE1Q8WV22 266 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 CCT6BQ92526 530 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 DNAJC19Q96DA6 116 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 C18orf8Q96DM3 657 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 SCOCQ9UIL1 159 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 M0QZ92 97 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 MAFGO15525 162 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 ZWINTO95229 277 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 SERPINB6P35237 376 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 PRKCIP41743 596 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 ITGA8P53708 1063 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 C11orf63Q6NUN7 778 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 C7orf31Q8N865 590 aa17.64■□□□□ 0.41
TCOF1-206ENST00000445265 RPAP3Q9H6T3 665 aaPredicted RBP17.64■□□□□ 0.41
TCOF1-206ENST00000445265 NOL3O60936 208 aaKnown RBP17.63■□□□□ 0.41
TCOF1-206ENST00000445265 CDO1Q16878 200 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 RDM1Q8NG50 284 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 SCYL1Q96KG9 808 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 MMTAG2Q9BU76 263 aaKnown RBP17.63■□□□□ 0.41
TCOF1-206ENST00000445265 PCSK1NQ9UHG2 260 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 MAP3K7O43318 606 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 PLA2G4FQ68DD2 849 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 NXNQ6DKJ4 435 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 XRRA1Q6P2D8 792 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 WDR75Q8IWA0 830 aaKnown RBP17.63■□□□□ 0.41
TCOF1-206ENST00000445265 RBBP8NLQ8NC74 664 aaPredicted RBP17.63■□□□□ 0.41
TCOF1-206ENST00000445265 NEU2Q9Y3R4 380 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 IGSF9BQ9UPX0 1349 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 OPHN1O60890 802 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 NR3C2P08235 984 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 ITGA4P13612 1032 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 ARFIP2P53365 341 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 TNFAIP2Q03169 654 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 ASPHQ12797 758 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 DEPDC1BQ8WUY9 529 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 SNX25Q9H3E2 840 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 GAKO14976 1311 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 PI4K2BG5E9Z4 385 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 DDX3XO00571 662 aaKnown RBP eCLIP17.63■□□□□ 0.419e-17■■□□□ 11.8
TCOF1-206ENST00000445265 GMNNO75496 209 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 HLA-DRAP01903 254 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 SLC12A3P55017 1021 aa17.63■□□□□ 0.41
TCOF1-206ENST00000445265 BAATQ14032 418 aaPredicted RBP17.63■□□□□ 0.41
TCOF1-206ENST00000445265 DCPSQ96C86 337 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms