RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 SNX27Q96L92 541 aa24.24■■□□□ 1.47
HDLBP-220ENST00000442730 ZNF396Q96N95 335 aaPredicted RBP24.24■■□□□ 1.47
HDLBP-220ENST00000442730 TOPORSQ9NS56 1045 aaPredicted RBP24.24■■□□□ 1.47
HDLBP-220ENST00000442730 SSX2IPQ9Y2D8 614 aa24.24■■□□□ 1.47
HDLBP-220ENST00000442730 SF3B1O75533 1304 aaKnown RBP eCLIP24.24■■□□□ 1.475e-6■■■■■ 68.9
HDLBP-220ENST00000442730 MEFVO15553 781 aaPredicted RBP24.23■■□□□ 1.47
HDLBP-220ENST00000442730 ZSCAN22P10073 491 aaPredicted RBP24.23■■□□□ 1.47
HDLBP-220ENST00000442730 HARSP12081 509 aaKnown RBP24.23■■□□□ 1.47
HDLBP-220ENST00000442730 PDIA4P13667 645 aaKnown RBP24.23■■□□□ 1.47
HDLBP-220ENST00000442730 SCP2P22307 547 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 CLCN4P51793 760 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 CBX2Q14781 532 aaPredicted RBP24.23■■□□□ 1.47
HDLBP-220ENST00000442730 XKR4Q5GH76 650 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 RRAGBQ5VZM2 374 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 ALKAL1Q6UXT8 129 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 HASPINQ8TF76 798 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 FIZ1Q96SL8 496 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 EPHX3Q9H6B9 360 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 RXFP1Q9HBX9 757 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 CDH22Q9UJ99 828 aa24.23■■□□□ 1.47
HDLBP-220ENST00000442730 A0A087X0B3 334 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 SMIM28A0A1B0GU29 152 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 TEX28O15482 410 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 TADA2AO75478 443 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 KLRC2P26717 231 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 MCL1Q07820 350 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 PKP1Q13835 747 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 USP41Q3LFD5 358 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 KIAA1841Q6NSI8 718 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 PHF7Q9BWX1 381 aaPredicted RBP24.22■■□□□ 1.47
HDLBP-220ENST00000442730 ADAM7Q9H2U9 754 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 ZHX3Q9H4I2 956 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 TFIP11Q9UBB9 837 aaKnown RBP24.22■■□□□ 1.47
HDLBP-220ENST00000442730 TBX20Q9UMR3 447 aa24.22■■□□□ 1.47
HDLBP-220ENST00000442730 SPTLC2O15270 562 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 TRAK2O60296 914 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 F13A1P00488 732 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 ITIH3Q06033 890 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 CCDC73Q6ZRK6 1079 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 GPR65Q8IYL9 337 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 SPRYD3Q8NCJ5 442 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 BICD1Q96G01 975 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 FBXL18Q96ME1 805 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 ACAP3Q96P50 834 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 HAPLN2Q9GZV7 340 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 CNTN3Q9P232 1028 aa24.21■■□□□ 1.47
HDLBP-220ENST00000442730 LOC730098B7Z3J9 87 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 PI4K2BG5E9Z4 385 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 HNRNPDLO14979 420 aaKnown RBP24.2■■□□□ 1.46
HDLBP-220ENST00000442730 CLDN3O15551 220 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 PPP6R2O75170 966 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 YEATS4O95619 227 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 PIGRP01833 764 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 ADH1AP07327 375 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 STAT6P42226 847 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 SOX4Q06945 474 aaPredicted RBP24.2■■□□□ 1.46
HDLBP-220ENST00000442730 RTP2Q5QGT7 225 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 RARS2Q5T160 578 aaKnown RBP24.2■■□□□ 1.46
HDLBP-220ENST00000442730 C12orf76Q8N812 135 aaPredicted RBP24.2■■□□□ 1.46
HDLBP-220ENST00000442730 ZMAT2Q96NC0 199 aaKnown RBP24.2■■□□□ 1.46
HDLBP-220ENST00000442730 GOLGA2P5Q9HBQ8 144 aa24.2■■□□□ 1.46
HDLBP-220ENST00000442730 MYMKA6NI61 221 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 TMEM189-UBE2V1I3L0A0 370 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 KCNE1P15382 129 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 NMT1P30419 496 aaKnown RBP24.19■■□□□ 1.46
HDLBP-220ENST00000442730 LIG4P49917 911 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 CLCNKBP51801 687 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 SEZ6Q53EL9 994 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 DYMQ7RTS9 669 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 RIN2Q8WYP3 895 aaPredicted RBP24.19■■□□□ 1.46
HDLBP-220ENST00000442730 DDX12PQ92771 950 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 UROC1Q96N76 676 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 C1QTNF1Q9BXJ1 281 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 SFXN1Q9H9B4 322 aa24.19■■□□□ 1.46
HDLBP-220ENST00000442730 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.19■■□□□ 1.46
HDLBP-220ENST00000442730 IGFBP6P24592 240 aaPredicted RBP24.18■■□□□ 1.46
HDLBP-220ENST00000442730 GTF2BQ00403 316 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 UPP1Q16831 310 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 FAM171A1Q5VUB5 890 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 CES5AQ6NT32 575 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 KANK3Q6NY19 840 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 SV2BQ7L1I2 683 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 SFR1Q86XK3 245 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 MAP4K3Q8IVH8 894 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 DNAJC19Q96DA6 116 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 TTPALQ9BTX7 342 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 PANK2Q9BZ23 570 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 SLC38A7Q9NVC3 462 aa24.18■■□□□ 1.46
HDLBP-220ENST00000442730 FAM189A1O60320 539 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 GLUD1P00367 558 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 WEE2P0C1S8 567 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 ABCD1P33897 745 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 MATR3P43243 847 aaKnown RBP eCLIP24.17■■□□□ 1.46
HDLBP-220ENST00000442730 CREMQ03060 361 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 ELAVL2Q12926 359 aaKnown RBP24.17■■□□□ 1.46
HDLBP-220ENST00000442730 SLC10A6Q3KNW5 377 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 FOXD4L6Q3SYB3 417 aaPredicted RBP24.17■■□□□ 1.46
HDLBP-220ENST00000442730 SLC39A4Q6P5W5 647 aa24.17■■□□□ 1.46
HDLBP-220ENST00000442730 PRSS55Q6UWB4 352 aaPredicted RBP24.17■■□□□ 1.46
HDLBP-220ENST00000442730 CD300LGQ6UXG3 332 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms