RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
TTC28-203ENST00000442232 PRSS55Q6UWB4 352 aaPredicted RBP12.94□□□□□ -0.34
TTC28-203ENST00000442232 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.94□□□□□ -0.34
TTC28-203ENST00000442232 GET4Q7L5D6 327 aaPredicted RBP12.94□□□□□ -0.34
TTC28-203ENST00000442232 C4orf32Q8N8J7 132 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 TIPINQ9BVW5 301 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 PRKD2Q9BZL6 878 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 NT5C3AQ9H0P0 336 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 SMOC2Q9H3U7 446 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 KCNK12Q9HB15 430 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 KMT5AQ9NQR1 393 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.94□□□□□ -0.34
TTC28-203ENST00000442232 CACNG4Q9UBN1 327 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 DUSP12Q9UNI6 340 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 RBM19Q9Y4C8 960 aaKnown RBP12.94□□□□□ -0.34
TTC28-203ENST00000442232 VWA8A3KMH1 1905 aa12.94□□□□□ -0.34
TTC28-203ENST00000442232 WDFY4Q6ZS81 3184 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 E9PMD0 336 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 GALR2O43603 387 aaPredicted RBP12.93□□□□□ -0.34
TTC28-203ENST00000442232 HIP1RO75146 1068 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 XYLBO75191 536 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 ZMYND10O75800 440 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 B3GAT3O94766 335 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
TTC28-203ENST00000442232 NPTX2P47972 431 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 SMTNP53814 917 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 GLRA4Q5JXX5 417 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 PPM1LQ5SGD2 360 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 NT5DC1Q5TFE4 455 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 NXPE3Q969Y0 559 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 KIF2CQ99661 725 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 TCHPQ9BT92 498 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 POLD4Q9HCU8 107 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 SLC38A7Q9NVC3 462 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 EPS15L1Q9UBC2 864 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 KCNG1Q9UIX4 513 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 FBXW11Q9UKB1 542 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 DOCK8Q8NF50 2099 aa12.93□□□□□ -0.34
TTC28-203ENST00000442232 PP2D1A8MPX8 630 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 TMEM189-UBE2V1I3L0A0 370 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 STK25O00506 426 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 EDN1P05305 212 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 HARSP12081 509 aaKnown RBP12.92□□□□□ -0.34
TTC28-203ENST00000442232 GRM5P41594 1212 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 TOB1P50616 345 aaPredicted RBP12.92□□□□□ -0.34
TTC28-203ENST00000442232 CLCN5P51795 746 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 STRN3Q13033 797 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 LILRA6Q6PI73 481 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 FEZF2Q8TBJ5 459 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 ZNF707Q96C28 371 aaPredicted RBP12.92□□□□□ -0.34
TTC28-203ENST00000442232 PPP1R10Q96QC0 940 aaKnown RBP12.92□□□□□ -0.34
TTC28-203ENST00000442232 ACO2Q99798 780 aaKnown RBP12.92□□□□□ -0.34
TTC28-203ENST00000442232 RTP3Q9BQQ7 232 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 TMEM134Q9H6X4 195 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.92□□□□□ -0.34
TTC28-203ENST00000442232 FAM86C1Q9NVL1 165 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 POLIQ9UNA4 740 aa12.92□□□□□ -0.34
TTC28-203ENST00000442232 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
TTC28-203ENST00000442232 H0Y858 1186 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 C8AP07357 584 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 MCF2P10911 925 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 FSHRP23945 695 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 GJB2P29033 226 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 HOXA9P31269 272 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 MATR3P43243 847 aaKnown RBP eCLIP12.91□□□□□ -0.34
TTC28-203ENST00000442232 MCM2P49736 904 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 OSTNP61366 133 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 ATP2C1P98194 919 aaPredicted RBP12.91□□□□□ -0.34
TTC28-203ENST00000442232 NAB2Q15742 525 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 RINT1Q6NUQ1 792 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 SIX5Q8N196 739 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 KCTD17Q8N5Z5 321 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 TMEM105Q8N8V8 129 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
TTC28-203ENST00000442232 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
TTC28-203ENST00000442232 MYADMQ96S97 322 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 RUSC1Q9BVN2 902 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 CDT1Q9H211 546 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 SMC3Q9UQE7 1217 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 ZFP37Q9Y6Q3 630 aaPredicted RBP12.91□□□□□ -0.34
TTC28-203ENST00000442232 CACNA1HO95180 2353 aa12.91□□□□□ -0.34
TTC28-203ENST00000442232 VWA3AA6NCI4 1184 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 H0YCG3 227 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 SLC16A4O15374 487 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 N4BP1O75113 896 aaKnown RBP12.9□□□□□ -0.34
TTC28-203ENST00000442232 PAPLNO95428 1278 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 CFHP08603 1231 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 SRFP11831 508 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 LAMP2P13473 410 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 GUCY2CP25092 1073 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 CDC25AP30304 524 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 OR1D2P34982 312 aa12.9□□□□□ -0.34
TTC28-203ENST00000442232 CLCNKBP51801 687 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms