RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 KATNBL1Q9H079 304 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 MRFAP1Q9Y605 127 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 TLL2Q9Y6L7 1015 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 DDX3XO00571 662 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■■■■□ 20.9
CPSF7-205ENST00000439958 MAGEB2O15479 319 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 ZEB2O60315 1214 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 CTSHP09668 335 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 TRIM32Q13049 653 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM270Q6UE05 265 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 ZNF467Q7Z7K2 595 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-205ENST00000439958 KREMEN1Q96MU8 473 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 GAS2O43903 313 aaKnown RBP16.23■□□□□ 0.19
CPSF7-205ENST00000439958 INHBEP58166 350 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 NCOA4Q13772 614 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 KIAA0319LQ8IZA0 1049 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 C7orf31Q8N865 590 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 SLC30A5Q8TAD4 765 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 APBA2Q99767 749 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 RPF1Q9H9Y2 349 aaKnown RBP16.23■□□□□ 0.19
CPSF7-205ENST00000439958 CDC23Q9UJX2 597 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 HES2Q9Y543 173 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 PCDHB4Q9Y5E5 795 aa16.23■□□□□ 0.19
CPSF7-205ENST00000439958 MYH10P35580 1976 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 A0A0G2JMZ2 1700 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 SMIM10L2AP0DMW4 78 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 SMIM10L2BP0DMW5 78 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 CTGFP29279 349 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 PDE6CP51160 858 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 FCGRTP55899 365 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 PTENP60484 403 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 PRKCZQ05513 592 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 CRELD2Q6UXH1 353 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-205ENST00000439958 EHD2Q9NZN4 543 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 ACKR2O00590 384 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 OGTO15294 1046 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 ABCD1P33897 745 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
CPSF7-205ENST00000439958 MORN1Q5T089 497 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 LMO3Q8TAP4 145 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 TMEM134Q9H6X4 195 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 LOXHD1Q8IVV2 1947 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 CTAGE15A4D2H0 777 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 CTAGE8P0CG41 777 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 GUCY2FP51841 1108 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 TERF1P54274 439 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 GALCP54803 685 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 JAM2P57087 298 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 MFSD10Q14728 455 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 FSCN1Q16658 493 aaKnown RBP16.22■□□□□ 0.19
CPSF7-205ENST00000439958 CTAGE6Q86UF2 777 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 CTAGE4Q8IX94 777 aa16.22■□□□□ 0.19
CPSF7-205ENST00000439958 GPC3P51654 580 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 PSMD6Q15008 389 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 LLGL1Q15334 1064 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 DAAM2Q86T65 1068 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 LNX1Q8TBB1 728 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-205ENST00000439958 ADPGKQ9BRR6 497 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 L2HGDHQ9H9P8 463 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 CTTNBP2NLQ9P2B4 639 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 UMODL1Q5DID0 1318 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 TREHO43280 583 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 MMEP08473 750 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 WEE2P0C1S8 567 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 NOP14P78316 857 aaKnown RBP16.21■□□□□ 0.19
CPSF7-205ENST00000439958 MBTD1Q05BQ5 628 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 ORC1Q13415 861 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 KCTD19Q17RG1 926 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-205ENST00000439958 ASTE1Q2TB18 679 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-205ENST00000439958 DPY19L2P1Q6NXN4 242 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 SESTD1Q86VW0 696 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 CAPNS2Q96L46 248 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 AGPAT1Q99943 283 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 CDT1Q9H211 546 aa16.21■□□□□ 0.19
CPSF7-205ENST00000439958 WDR81Q562E7 1941 aa16.21■□□□□ 0.18
CPSF7-205ENST00000439958 CA12O43570 354 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 NFX1Q12986 1120 aaKnown RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 KIF22Q14807 665 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 GLRA4Q5JXX5 417 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 ZPBP2Q6X784 338 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 SOCS4Q8WXH5 440 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 FBXL18Q96ME1 805 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 IFT122Q9HBG6 1241 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 OSGEPQ9NPF4 335 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 LOC102724159A0A0B4J2E5 919 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 TNNC2P02585 160 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 FTLP02792 175 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 ARF4P18085 180 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 CPT1AP50416 773 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 MYL6P60660 151 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 PDE4CQ08493 712 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 PWP2Q15269 919 aaKnown RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 MFSD14CQ5VZR4 134 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 CDHR5Q9HBB8 845 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 PRMT7Q9NVM4 692 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms