RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 RECQL4O94761 1208 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 ACRP10323 421 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 KRT13P13646 458 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 SYN1P17600 705 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 EPHB4P54760 987 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 PPP3CAQ08209 521 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 KCNH2Q12809 1159 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 HSP90AA2PQ14568 343 aaPredicted RBP8.12□□□□□ -1.11
UBR3-205ENST00000439681 NR1I3Q14994 352 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 MAN2A1Q16706 1144 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 VWA3BQ502W6 1294 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 CNKSR3Q6P9H4 555 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 DPF3Q92784 378 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 LPPQ93052 612 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 FAM84AQ96KN4 292 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 APOL6Q9BWW8 343 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 PLEKHA5Q9HAU0 1116 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 IL23AQ9NPF7 189 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 TOPORSQ9NS56 1045 aaPredicted RBP8.12□□□□□ -1.11
UBR3-205ENST00000439681 C1orf112Q9NSG2 853 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.12□□□□□ -1.11
UBR3-205ENST00000439681 PTPRJQ12913 1337 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 TEX33O43247 280 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 SERPINC1P01008 464 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 SKIP12755 728 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 ITGA4P13612 1032 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 MRE11P49959 708 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 RAB27AP51159 221 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 AFF1P51825 1210 aaKnown RBP8.12□□□□□ -1.11
UBR3-205ENST00000439681 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.12□□□□□ -1.11
UBR3-205ENST00000439681 RPUSD2Q8IZ73 545 aaKnown RBP8.12□□□□□ -1.11
UBR3-205ENST00000439681 GSTCDQ8NEC7 633 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 OR5B17Q8NGF7 314 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 FAM212AQ96EL1 285 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 SNX27Q96L92 541 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 ZMAT2Q96NC0 199 aaKnown RBP8.12□□□□□ -1.11
UBR3-205ENST00000439681 NDST4Q9H3R1 872 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 RNF19AQ9NV58 838 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 MIOSQ9NXC5 875 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 KLK14Q9P0G3 267 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 IFNKQ9P0W0 207 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 PARP2Q9UGN5 583 aa8.12□□□□□ -1.11
UBR3-205ENST00000439681 ZMYND8Q9ULU4 1186 aaPredicted RBP8.12□□□□□ -1.11
UBR3-205ENST00000439681 MYH11P35749 1972 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 LGALS16A8MUM7 142 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 IL18RAPO95256 599 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 EOMESO95936 686 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 C4BPAP04003 597 aaKnown RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 PFKMP08237 780 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 DLATP10515 647 aaKnown RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 GCLMP48507 274 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 UBASH3AP57075 661 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 PPP2R3AQ06190 1150 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 IKBKEQ14164 716 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ZBTB6Q15916 424 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 CBWD6Q4V339 395 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 DCAF17Q5H9S7 520 aaPredicted RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 CBWD3Q5JTY5 395 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 CBWD5Q5RIA9 395 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 LMBRD2Q68DH5 695 aaPredicted RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 JADE1Q6IE81 842 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 C15orf39Q6ZRI6 1047 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 CD302Q8IX05 232 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 EFCAB13Q8IY85 973 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 TMEM130Q8N3G9 435 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ANKRD20A12PQ8NF67 263 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 CGRRF1Q99675 332 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 TMEM117Q9H0C3 514 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ASB7Q9H672 318 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ELAC1Q9H777 363 aaKnown RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 GIT1Q9Y2X7 761 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 SMIM28A0A1B0GU29 152 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ABHD14A-ACY1A0A1B0GW23 586 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 PTGESO14684 152 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 PMM2O15305 246 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 INPPL1O15357 1258 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 OFD1O75665 1012 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 NFICP08651 508 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 KCNE1P15382 129 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 GTF2H1P32780 548 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 FMO5P49326 533 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ZNF75DP51815 510 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 YARSP54577 528 aaKnown RBP8.11□□□□□ -1.11
UBR3-205ENST00000439681 FPGSQ05932 587 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 PPIGQ13427 754 aaKnown RBP eCLIP8.11□□□□□ -1.11
UBR3-205ENST00000439681 SURF1Q15526 300 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 TCERG1LQ5VWI1 586 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ZNF365Q70YC5 407 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 SV2AQ7L0J3 742 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 WDR49Q8IV35 697 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 RNF169Q8NCN4 708 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 CXorf38Q8TB03 319 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 PGBD4Q96DM1 585 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
UBR3-205ENST00000439681 FNBP1Q96RU3 617 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms