RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 MKRN4PQ13434 485 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 DUOXA2Q1HG44 320 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 ZC2HC1CQ53FD0 456 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 SPOUT1Q5T280 376 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TRIM65Q6PJ69 517 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 CYFIP1Q7L576 1253 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 CATSPER4Q7RTX7 472 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 LONP2Q86WA8 852 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 DTX3LQ8TDB6 740 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 EXT2Q93063 718 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 CCDC124Q96CT7 223 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 SH2D3AQ9BRG2 576 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 MKNK1Q9BUB5 465 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 GCOM2Q9BZD3 368 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TRIM15Q9C019 465 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 NBPF3Q9H094 633 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 ANKZF1Q9H8Y5 726 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 KLHL11Q9NVR0 708 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 DAGLAQ9Y4D2 1042 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 OSBPP22059 807 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 YWHABP31946 246 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 MORF4L2Q15014 288 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 CIAPIN1Q6FI81 312 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 RWDD4Q6NW29 188 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 CDKL3Q8IVW4 592 aaPredicted RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 KIF2BQ8N4N8 673 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 ICA1LQ8NDH6 482 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TPCN2Q8NHX9 752 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 FOXP3Q9BZS1 431 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TMEM117Q9H0C3 514 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TRPV6Q9H1D0 765 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 NPHS2Q9NP85 383 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 PAMP19021 973 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 RPA1P27694 616 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 KDSRQ06136 332 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TMTC4Q5T4D3 741 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 ALKBH8Q96BT7 664 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 OLFM3Q96PB7 478 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 RANBP17Q9H2T7 1088 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 QTRT2Q9H974 415 aaKnown RBP11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 SUN2Q9UH99 717 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 SLC4A7Q9Y6M7 1214 aa11.83□□□□□ -0.52
SEMA4D-211ENST00000438547 TNS3Q68CZ2 1445 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 HERVK_113P62684 666 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 CDK17Q00537 523 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 PDCD2Q16342 344 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 C1orf228Q6PIY5 440 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 ARHGAP27Q6ZUM4 889 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 C16orf86Q6ZW13 317 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 RSPH3Q86UC2 560 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 LRRN4CLQ8ND94 238 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 TSSK1BQ9BXA7 367 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 OSBPL8Q9BZF1 889 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 MRPL40Q9NQ50 206 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 SUGT1Q9Y2Z0 365 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 ECE2O60344 883 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 PYGBP11216 843 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 ERFP50548 548 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 ZBTB17Q13105 803 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 HIC1Q14526 733 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 SCG3Q8WXD2 468 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 SH3GL3Q99963 347 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 FAM49AQ9H0Q0 323 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 ADA2Q9NZK5 511 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 TSPOAP1O95153 1857 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 AP3M2P53677 418 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 KLC1Q07866 573 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 NTRK3Q16288 839 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 PABPC3Q9H361 631 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 DHX35Q9H5Z1 703 aaKnown RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 KBTBD4Q9NVX7 518 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 IRAK4Q9NWZ3 460 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 PSMC3IPQ9P2W1 217 aaPredicted RBP11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 ZHX2Q9Y6X8 837 aa11.82□□□□□ -0.52
SEMA4D-211ENST00000438547 F5H423 210 aaPredicted RBP11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 CHD1O14646 1710 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 NDUFB10O96000 172 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 COPB2P35606 906 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 MAGEA4P43358 317 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 PAPOLAP51003 745 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 TMEM259Q4ZIN3 620 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 TEDDM1Q5T9Z0 273 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 FBXO33Q7Z6M2 555 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 DAGLBQ8NCG7 672 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 TIPINQ9BVW5 301 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 C2orf40Q9H1Z8 148 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 UBN1Q9NPG3 1134 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 KCND2Q9NZV8 630 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 CEP152O94986 1710 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 RNF103-CHMP3A0A140T963 221 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 NVLO15381 856 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 ENO1P06733 434 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 PHKA2P46019 1235 aa11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 SNRNP35Q16560 246 aaKnown RBP11.81□□□□□ -0.52
SEMA4D-211ENST00000438547 DSTYKQ6XUX3 929 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms