RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 TMCO5BA8MYB1 307 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 CCDC188H7C350 402 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 PGRMC1O00264 195 aaKnown RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 LIG4P49917 911 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 MAP2K1Q02750 393 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 FAM160B1Q5W0V3 765 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SLC39A4Q6P5W5 647 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 NT5DC3Q86UY8 548 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ADGRA3Q8IWK6 1321 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 PPM1KQ8N3J5 372 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 TRIB2Q92519 343 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SHC3Q92529 594 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 CCDC127Q96BQ5 260 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 HES6Q96HZ4 224 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SPATA33Q96N06 139 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 KATNBL1Q9H079 304 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 ABHD16BQ9H3Z7 469 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 NRBP2Q9NSY0 501 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 SEPT11Q9NVA2 429 aaKnown RBP12.86□□□□□ -0.35
CTCFL-209ENST00000433949 RAB20Q9NX57 234 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 STXBP5LQ9Y2K9 1186 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 STYXL1Q9Y6J8 313 aa12.86□□□□□ -0.35
CTCFL-209ENST00000433949 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
CTCFL-209ENST00000433949 ADCY6O43306 1168 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 EXTL3O43909 919 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 RTN2O75298 545 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
CTCFL-209ENST00000433949 PIGRP01833 764 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 HOXC6P09630 235 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 SMPD1P17405 629 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 RASGEF1CQ8N431 466 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 EIF1ADQ8N9N8 165 aaKnown RBP12.85□□□□□ -0.35
CTCFL-209ENST00000433949 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.85□□□□□ -0.352e-13■□□□□ 8.7
CTCFL-209ENST00000433949 VTA1Q9NP79 307 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 EHD2Q9NZN4 543 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 PLXNA1Q9UIW2 1896 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 FKTNO75072 461 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 DNA2P51530 1060 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 CLDN10P78369 228 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-209ENST00000433949 GCNT1Q02742 428 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 NNTQ13423 1086 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 CELF3Q5SZQ8 465 aaKnown RBP12.85□□□□□ -0.35
CTCFL-209ENST00000433949 EXOC8Q8IYI6 725 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 EPS8L1Q8TE68 723 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 TTC7AQ9ULT0 858 aaPredicted RBP12.85□□□□□ -0.35
CTCFL-209ENST00000433949 HPCAL4Q9UM19 191 aa12.85□□□□□ -0.35
CTCFL-209ENST00000433949 LOC102724159A0A0B4J2E5 919 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 POLR3GO15318 223 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 ZMYND10O75800 440 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 MYCP01106 439 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 ABCB4P21439 1286 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 SOX10P56693 466 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 PWP2Q15269 919 aaKnown RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 PPP2R5EQ16537 467 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 METTL7BQ6UX53 244 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 TRIM50Q86XT4 487 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 METTL13Q8N6R0 699 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 NAP1L3Q99457 506 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 CFHR5Q9BXR6 569 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 GDF3Q9NR23 364 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 SMARCAL1Q9NZC9 954 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 GSTTP1A0A1W2PQM5 241 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 K7ERI5 159 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 DYNC1LI2O43237 492 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 GAS2O43903 313 aaKnown RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 CEP104O60308 925 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 MYBL2P10244 700 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 ATP4AP20648 1035 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 MARK3P27448 753 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 ARL2P36404 184 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 USP8P40818 1118 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 PDE6CP51160 858 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 GPC5P78333 572 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 PAK2Q13177 524 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 OLFML2BQ68BL8 750 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 C11orf63Q6NUN7 778 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 SV2AQ7L0J3 742 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 TAS1R3Q7RTX0 852 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
CTCFL-209ENST00000433949 DEPTORQ8TB45 409 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 RAET1EQ8TD07 263 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 HELQQ8TDG4 1101 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 HDAC7Q8WUI4 952 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 SEPT1Q8WYJ6 367 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 CAVIN3Q969G5 261 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 KREMEN1Q96MU8 473 aa12.84□□□□□ -0.35
CTCFL-209ENST00000433949 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms