RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 RAPGEF1Q13905 1077 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 HABP4Q5JVS0 413 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 PRR23CQ6ZRP0 262 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 MILR1Q7Z6M3 343 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 FAM124AQ86V42 546 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 IFNLR1Q8IU57 520 aaPredicted RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 SPATA18Q8TC71 538 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 UTP4Q969X6 686 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 HSD3B7Q9H2F3 369 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 LGR6Q9HBX8 967 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 WDR6Q9NNW5 1121 aaKnown RBP11.57□□□□□ -0.56
CCDC171-202ENST00000432954 TBC1D23Q9NUY8 699 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 SNX5Q9Y5X3 404 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 SAR1BQ9Y6B6 198 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 CARMIL2Q6F5E8 1435 aa11.57□□□□□ -0.56
CCDC171-202ENST00000432954 MYH15Q9Y2K3 1946 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
CCDC171-202ENST00000432954 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 H7C0C1 242 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 O00370 1275 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 SLC9A3R1O14745 358 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-202ENST00000432954 SCO2O43819 266 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 ATP5HO75947 161 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 ESRRAP11474 423 aaPredicted RBP11.56□□□□□ -0.56
CCDC171-202ENST00000432954 KRT13P13646 458 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 P4HA1P13674 534 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 HSPA6P17066 643 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 PEX3P56589 373 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 ATP6V0D1P61421 351 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 GSTO1P78417 241 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 BORAQ6PGQ7 559 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 PCYOX1LQ8NBM8 494 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 GALNT11Q8NCW6 608 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 SUPT20HQ8NEM7 779 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 ENGASEQ8NFI3 743 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 CHPT1Q8WUD6 406 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 HSPH1Q92598 858 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 TSNARE1Q96NA8 513 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 BIRC8Q96P09 236 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 ZBED2Q9BTP6 218 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 CCDC134Q9H6E4 229 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 RIC8AQ9NPQ8 531 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 IL37Q9NZH6 218 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 RABGEF1Q9UJ41 708 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
CCDC171-202ENST00000432954 PA2G4Q9UQ80 394 aaKnown RBP11.56□□□□□ -0.56
CCDC171-202ENST00000432954 RBMX2Q9Y388 322 aaKnown RBP11.56□□□□□ -0.56
CCDC171-202ENST00000432954 TYW5A2RUC4 315 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF862O60290 1169 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 KRT10P13645 584 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 PRKCAP17252 672 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 GM2AP17900 193 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 ADD2P35612 726 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 SRP54P61011 504 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 TIGD2Q4W5G0 525 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 TMTC3Q6ZXV5 915 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 AKAP14Q86UN6 197 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 DTX3Q8N9I9 347 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 C12orf50Q8NA57 414 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 PIP4K2CQ8TBX8 421 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 DPF2Q92785 391 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 SLC47A1Q96FL8 570 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 PRICKLE1Q96MT3 831 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 RPRD1AQ96P16 312 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 TESK2Q96S53 571 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 OLFM1Q99784 485 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 DDX50Q9BQ39 737 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 RBM38Q9H0Z9 239 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 LRMDAQ9H2I8 198 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 MOV10Q9HCE1 1003 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 DDX18Q9NVP1 670 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 MRPL39Q9NYK5 338 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 THEGQ9P2T0 379 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 MBD2Q9UBB5 411 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 LAMP5Q9UJQ1 280 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 TRIM33Q9UPN9 1127 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 DMTF1Q9Y222 760 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 APOL1O14791 398 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 DKC1O60832 514 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 PKLRP30613 574 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 NUDT1P36639 197 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 GPR85P60893 370 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 GABREP78334 506 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 COG7P83436 770 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 ZC3H12BQ5HYM0 836 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 KLHDC10Q6PID8 442 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 RANBP10Q6VN20 620 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 ZNF677Q86XU0 584 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 SH3RF3Q8TEJ3 882 aaPredicted RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 HDAC11Q96DB2 347 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 FAR2Q96K12 515 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 PSD2Q9BQI7 771 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 KCNN2Q9H2S1 579 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 GRID1Q9ULK0 1009 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 STRIP2Q9ULQ0 834 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 UTP11Q9Y3A2 253 aaKnown RBP11.55□□□□□ -0.56
CCDC171-202ENST00000432954 WDR17Q8IZU2 1322 aa11.55□□□□□ -0.56
CCDC171-202ENST00000432954 CAPN14A8MX76 684 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms