RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PRIMPOLQ96LW4 560 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 TTPALQ9BTX7 342 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 C2orf40Q9H1Z8 148 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 HCFC1R1Q9NWW0 138 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 ZFHX2Q9C0A1 2572 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 SF3B1O75533 1304 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 BRCC3P46736 316 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 RBM25P49756 843 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 SEZ6Q53EL9 994 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 ATF7IP2Q5U623 682 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 RSPO2Q6UXX9 243 aaPredicted RBP15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 FRMD5Q7Z6J6 570 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 SLC44A3Q8N4M1 653 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 GPR152Q8TDT2 470 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 IFT74Q96LB3 600 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 ADPGKQ9BRR6 497 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 RUSC1Q9BVN2 902 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 PRKD2Q9BZL6 878 aa15.7■□□□□ 0.1
SMARCE1-205ENST00000431889 C3orf58Q8NDZ4 430 aa15.69■□□□□ 0.1
SMARCE1-205ENST00000431889 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-205ENST00000431889 FNIP2Q9P278 1114 aa15.69■□□□□ 0.1
SMARCE1-205ENST00000431889 NOL7Q9UMY1 257 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-205ENST00000431889 NUMBLQ9Y6R0 609 aa15.69■□□□□ 0.1
SMARCE1-205ENST00000431889 MYH15Q9Y2K3 1946 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 HIP1RO75146 1068 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 ZMYND10O75800 440 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 B3GAT3O94766 335 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 C8AP07357 584 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 DCNP07585 359 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 RFX1P22670 979 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 TKTP29401 623 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 OR1D2P34982 312 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 FXR2P51116 673 aaKnown RBP eCLIP15.68■□□□□ 0.18e-8■□□□□ 8.3
SMARCE1-205ENST00000431889 SOX4Q06945 474 aaPredicted RBP15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 HAUS3Q68CZ6 603 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 MCTP1Q6DN14 999 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 CD300LGQ6UXG3 332 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 DAW1Q8N136 415 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 ITFG1Q8TB96 612 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 ING5Q8WYH8 240 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 STAMQ92783 540 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 TARS2Q9BW92 718 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 PLEKHA4Q9H4M7 779 aa15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMARCE1-205ENST00000431889 K7ERI5 159 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 LRRN2O75325 713 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 LAMP2P13473 410 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 FSHRP23945 695 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 NPTX2P47972 431 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 CLCN5P51795 746 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 ARPP19P56211 112 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 C8orf34Q49A92 452 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 PPM1LQ5SGD2 360 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 ELMSAN1Q6PJG2 1045 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 PARM1Q6UWI2 310 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 TAS1R3Q7RTX0 852 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 FGF14Q92915 247 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 ZBTB45Q96K62 511 aaPredicted RBP15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 CDT1Q9H211 546 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 ZDHHC7Q9NXF8 308 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 IGSF9Q9P2J2 1179 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 EPS15L1Q9UBC2 864 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 FBXW11Q9UKB1 542 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 FRYLO94915 3013 aa15.67■□□□□ 0.1
SMARCE1-205ENST00000431889 NPHP3-ACAD11A0A0J9YXS1 232 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 SLC16A4O15374 487 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 AOC1P19801 751 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 HMGN5P82970 282 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 PPP2R5AQ15172 486 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 ZNF568Q3ZCX4 644 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 LIN9Q5TKA1 542 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 PIK3R5Q8WYR1 880 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 C18orf25Q96B23 403 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 ZMAT2Q96NC0 199 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 PPP1R10Q96QC0 940 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 MMTAG2Q9BU76 263 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 DPP7Q9UHL4 492 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 CDY1Q9Y6F8 540 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 NOTCH4Q99466 2003 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 CACNA1HO95180 2353 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 MYH11P35749 1972 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 WDR87Q6ZQQ6 2873 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 CD2BP2O95400 341 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 SPAG1Q07617 926 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 DCAF4L1Q3SXM0 396 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 AXDND1Q5T1B0 1012 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 IGSF22Q8N9C0 903 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 KIFAP3Q92845 792 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 ZSCAN31Q96LW9 406 aaPredicted RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 ACO2Q99798 780 aaKnown RBP15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 TCHPQ9BT92 498 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 FOXQ1Q9C009 403 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 TBC1D17Q9HA65 648 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 KMT5AQ9NQR1 393 aa15.66■□□□□ 0.1
SMARCE1-205ENST00000431889 SMIM28A0A1B0GU29 152 aa15.65■□□□□ 0.1
SMARCE1-205ENST00000431889 MEFVO15553 781 aaPredicted RBP15.65■□□□□ 0.1
SMARCE1-205ENST00000431889 ST18O60284 1047 aa15.65■□□□□ 0.1
SMARCE1-205ENST00000431889 U2AF2P26368 475 aaKnown RBP eCLIP15.65■□□□□ 0.18e-11■■■■□ 22.5
SMARCE1-205ENST00000431889 GPC5P78333 572 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms