RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 DMP1Q13316 513 aaPredicted RBP18.78■□□□□ 0.6
TRIM39-209ENST00000428728 TDGQ13569 410 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 ZNF568Q3ZCX4 644 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 DTHD1Q6ZMT9 781 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 GET4Q7L5D6 327 aaPredicted RBP18.78■□□□□ 0.6
TRIM39-209ENST00000428728 KCNK18Q7Z418 384 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 APBB1IPQ7Z5R6 666 aaPredicted RBP18.78■□□□□ 0.6
TRIM39-209ENST00000428728 GPR65Q8IYL9 337 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 DAW1Q8N136 415 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 TMEM105Q8N8V8 129 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 CEP120Q8N960 986 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 HDAC7Q8WUI4 952 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 PIK3R5Q8WYR1 880 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 NT5C3AQ9H0P0 336 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 KCNK12Q9HB15 430 aa18.78■□□□□ 0.6
TRIM39-209ENST00000428728 CD2BP2O95400 341 aaKnown RBP18.77■□□□□ 0.6
TRIM39-209ENST00000428728 OSTNP61366 133 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 RAD51AP2Q09MP3 1159 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 CYP26C1Q6V0L0 522 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 RSAD2Q8WXG1 361 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 TMX3Q96JJ7 454 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 DRC1Q96MC2 740 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 MYADMQ96S97 322 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 MMTAG2Q9BU76 263 aaKnown RBP18.77■□□□□ 0.6
TRIM39-209ENST00000428728 RHOBTB2Q9BYZ6 727 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 CDT1Q9H211 546 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 GOLGA2P5Q9HBQ8 144 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 KMT5AQ9NQR1 393 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 ZDHHC7Q9NXF8 308 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 FBXW11Q9UKB1 542 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 FBXL21Q9UKT6 434 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 DUSP12Q9UNI6 340 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 TNFSF13BQ9Y275 285 aa18.77■□□□□ 0.6
TRIM39-209ENST00000428728 NOTCH4Q99466 2003 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 H3BQV1 296 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 NARSO43776 548 aaKnown RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 ZMYND10O75800 440 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 HARSP12081 509 aaKnown RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 GJB2P29033 226 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 ELAVL2Q12926 359 aaKnown RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 MAPK7Q13164 816 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 RINT1Q6NUQ1 792 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 TAS1R3Q7RTX0 852 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 FLCNQ8NFG4 579 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 LNX1Q8TBB1 728 aaPredicted RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 PPP1R10Q96QC0 940 aaKnown RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 PLIN2Q99541 437 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 ACO2Q99798 780 aaKnown RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 CLSTN3Q9BQT9 956 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 CCDC94Q9BW85 323 aaPredicted RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 MRPL4Q9BYD3 311 aaKnown RBP18.76■□□□□ 0.59
TRIM39-209ENST00000428728 PRKD2Q9BZL6 878 aa18.76■□□□□ 0.59
TRIM39-209ENST00000428728 ANK1P16157 1881 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 MIA3Q5JRA6 1907 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 H0Y858 1186 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 SLC16A4O15374 487 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 ADAM12O43184 909 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 B3GAT3O94766 335 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 C1RP00736 705 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 IGFBP6P24592 240 aaPredicted RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 CLCNKBP51801 687 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 YARSP54577 528 aaKnown RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 ATP2C1P98194 919 aaPredicted RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 RILPL1Q5EBL4 403 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 LIN9Q5TKA1 542 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 CWF19L1Q69YN2 538 aaKnown RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 ASTLQ6HA08 431 aaPredicted RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 TARS2Q9BW92 718 aaKnown RBP18.75■□□□□ 0.59
TRIM39-209ENST00000428728 IGSF9Q9P2J2 1179 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 ARHGAP28Q9P2N2 729 aa18.75■□□□□ 0.59
TRIM39-209ENST00000428728 VWA3AA6NCI4 1184 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 SFI1A8K8P3 1242 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 I3L4J1 428 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 GALR2O43603 387 aaPredicted RBP18.74■□□□□ 0.59
TRIM39-209ENST00000428728 C8AP07357 584 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 GRM5P41594 1212 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 C1orf186Q6ZWK4 172 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 C3orf58Q8NDZ4 430 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 ATOH1Q92858 354 aaPredicted RBP18.74■□□□□ 0.59
TRIM39-209ENST00000428728 TMEM134Q9H6X4 195 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 TOPORSQ9NS56 1045 aaPredicted RBP18.74■□□□□ 0.59
TRIM39-209ENST00000428728 EPS15L1Q9UBC2 864 aa18.74■□□□□ 0.59
TRIM39-209ENST00000428728 TMEM189-UBE2V1I3L0A0 370 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 PAPLNO95428 1278 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 CFHP08603 1231 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 TKTP29401 623 aaKnown RBP18.73■□□□□ 0.59
TRIM39-209ENST00000428728 BRCC3P46736 316 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 SOX4Q06945 474 aaPredicted RBP18.73■□□□□ 0.59
TRIM39-209ENST00000428728 PPM1LQ5SGD2 360 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 PDXDC1Q6P996 788 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 GRASPQ7Z6J2 395 aaPredicted RBP18.73■□□□□ 0.59
TRIM39-209ENST00000428728 SIX5Q8N196 739 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 ST13P5Q8NFI4 369 aaPredicted RBP18.73■□□□□ 0.59
TRIM39-209ENST00000428728 CDK5RAP3Q96JB5 506 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 UROC1Q96N76 676 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 PNMA5Q96PV4 448 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 TCHPQ9BT92 498 aa18.73■□□□□ 0.59
TRIM39-209ENST00000428728 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms