RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 XYLBO75191 536 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 TMEM127O75204 238 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 ODC1P11926 461 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 ATN1P54259 1190 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 CACNB1Q02641 598 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 IFT88Q13099 833 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 TBC1D9BQ66K14 1250 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 HEATR6Q6AI08 1181 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 SH3RF3Q8TEJ3 882 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 ANKRD49Q8WVL7 239 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 KLHL11Q9NVR0 708 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 OPLAHO14841 1288 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 P4HA2O15460 535 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 MBL2P11226 248 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 CPA1P15085 419 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 KLRC2P26717 231 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 PRKAA1Q13131 559 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 WHAMMP3Q1A5X7 153 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 ANGEL2Q5VTE6 544 aaKnown RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 L3MBTL3Q96JM7 780 aaPredicted RBP6.05□□□□□ -1.44
HERC4-206ENST00000427635 FAM213AQ9BRX8 229 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 SLC39A3Q9BRY0 314 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 CATSPERBQ9H7T0 1116 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 GGA3Q9NZ52 723 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 COL15A1P39059 1388 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 PEG3Q9GZU2 1588 aa6.05□□□□□ -1.44
HERC4-206ENST00000427635 IGHDP01880 384 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PDGFRBP09619 1106 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TCP1P17987 556 aaKnown RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 IL4RP24394 825 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 MZF1P28698 734 aaPredicted RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 EPHX2P34913 555 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 GRK3P35626 688 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 SLC20A2Q08357 652 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 SGCGQ13326 291 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 MAPRE1Q15691 268 aaKnown RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 FSCBQ5H9T9 825 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PHACTR4Q8IZ21 702 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 OR6P1Q8NGX9 317 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PHACTR3Q96KR7 559 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 MED15Q96RN5 788 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 C1QTNF7Q9BXJ2 289 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 RNF26Q9BY78 433 aaPredicted RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 SH3GLB2Q9NR46 395 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 EMILIN3Q9NT22 766 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 GINM1Q9NU53 330 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TMEM161AQ9NX61 479 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 PLEKHG1Q9ULL1 1385 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 WDR97A6NE52 1622 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ABCC4O15439 1325 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 FLT1P17948 1338 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 NEO1Q92859 1461 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PRKCBP05771 671 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 HSD3B2P26439 372 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 SLC11A2P49281 568 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ATP1A2P50993 1020 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PSMC5P62195 406 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 MRPS15P82914 257 aaKnown RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 SPDYAQ5MJ70 313 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PLEKHM3Q6ZWE6 761 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PLEKHH3Q7Z736 793 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ATPAF2Q8N5M1 289 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 DYNLL2Q96FJ2 89 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 NUP85Q9BW27 656 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 FAM96AQ9H5X1 160 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 GTF2A1LQ9UNN4 478 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PKP3Q9Y446 797 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 PTCH1Q13635 1447 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ZBTB5O15062 677 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ASAP2O43150 1006 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TNNI3P19429 210 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 CACNB3P54284 484 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 SF3A3Q12874 501 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERC4-206ENST00000427635 EFTUD2Q15029 972 aaKnown RBP eCLIP6.04□□□□□ -1.44
HERC4-206ENST00000427635 SLFNL1Q499Z3 407 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TJAP1Q5JTD0 557 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 C10orf120Q5SQS8 335 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ARL6IP6Q8N6S5 226 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ATP6V0D2Q8N8Y2 350 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 CLMNQ96JQ2 1002 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 FOXP1Q9H334 677 aaPredicted RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 TMEM63CQ9P1W3 806 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 APPL1Q9UKG1 709 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 RPAP1Q9BWH6 1393 aaPredicted RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 MANSC4A6NHS7 340 aaPredicted RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 NDUFS3O75489 264 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TIPRLO75663 272 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 P4HBP07237 508 aaKnown RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 PCSK1P29120 753 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 SOAT1P35610 550 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 STAT5BP51692 787 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TAP1Q03518 808 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 NAA35Q5VZE5 725 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 HLA-DQA1Q5Y7H0 255 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 CRLF3Q8IUI8 442 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 TMEM199Q8N511 208 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 ERP27Q96DN0 273 aa6.04□□□□□ -1.44
HERC4-206ENST00000427635 XPO6Q96QU8 1125 aaKnown RBP6.04□□□□□ -1.44
HERC4-206ENST00000427635 RUBCNLQ9H714 662 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms