RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 URODP06132 367 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 SRGAP2BP0DMP2 458 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 CBX2Q14781 532 aaPredicted RBP21■□□□□ 0.95
COL9A2-204ENST00000427563 RTP2Q5QGT7 225 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 TMEM130Q8N3G9 435 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 RASSF8Q8NHQ8 419 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 SNX27Q96L92 541 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 PHF7Q9BWX1 381 aaPredicted RBP21■□□□□ 0.95
COL9A2-204ENST00000427563 ADAM7Q9H2U9 754 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 LARSQ9P2J5 1176 aaKnown RBP21■□□□□ 0.95
COL9A2-204ENST00000427563 TRIOO75962 3097 aa21■□□□□ 0.95
COL9A2-204ENST00000427563 NR1I2O75469 434 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 TOM1L1O75674 476 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 HARSP12081 509 aaKnown RBP20.99■□□□□ 0.95
COL9A2-204ENST00000427563 KLRC2P26717 231 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 NMT1P30419 496 aaKnown RBP20.99■□□□□ 0.95
COL9A2-204ENST00000427563 SMTNP53814 917 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 STRN3Q13033 797 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
COL9A2-204ENST00000427563 ZPBP2Q6X784 338 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 MYCT1Q8N699 235 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 KRI1Q8N9T8 703 aaKnown RBP20.99■□□□□ 0.95
COL9A2-204ENST00000427563 SPRYD3Q8NCJ5 442 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 C3orf58Q8NDZ4 430 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 FBXL18Q96ME1 805 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 EMILIN2Q9BXX0 1053 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 POMKQ9H5K3 350 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 PARVGQ9HBI0 331 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 ANKFY1Q9P2R3 1169 aa20.99■□□□□ 0.95
COL9A2-204ENST00000427563 MYMKA6NI61 221 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 TADA2AO75478 443 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 FAM13AO94988 1023 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 CLCNKBP51801 687 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 MCL1Q07820 350 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 NOLC1Q14978 699 aaKnown RBP eCLIP20.98■□□□□ 0.95
COL9A2-204ENST00000427563 SLC10A6Q3KNW5 377 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 TPRNQ4KMQ1 711 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 SLC39A4Q6P5W5 647 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 RNF135Q8IUD6 432 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 DNAJC19Q96DA6 116 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 POP1Q99575 1024 aaKnown RBP20.98■□□□□ 0.95
COL9A2-204ENST00000427563 CCDC94Q9BW85 323 aaPredicted RBP20.98■□□□□ 0.95
COL9A2-204ENST00000427563 IKZF4Q9H2S9 585 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 DZANK1Q9NVP4 752 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 CNTN3Q9P232 1028 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 STK17AQ9UEE5 414 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 TBX20Q9UMR3 447 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 ANK1P16157 1881 aa20.98■□□□□ 0.95
COL9A2-204ENST00000427563 FAM86C2PA6NEL3 165 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 K7ENM7 598 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 TRAK2O60296 914 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 FAM189A1O60320 539 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 PIGRP01833 764 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 KCNE1P15382 129 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 RPL17P18621 184 aaKnown RBP20.97■□□□□ 0.95
COL9A2-204ENST00000427563 UPP1Q16831 310 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 USP41Q3LFD5 358 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 ZBTB41Q5SVQ8 909 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 RRAGBQ5VZM2 374 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 PRSS55Q6UWB4 352 aaPredicted RBP20.97■□□□□ 0.95
COL9A2-204ENST00000427563 DYMQ7RTS9 669 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 APBB1IPQ7Z5R6 666 aaPredicted RBP20.97■□□□□ 0.95
COL9A2-204ENST00000427563 PPFIBP1Q86W92 1011 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 RIN2Q8WYP3 895 aaPredicted RBP20.97■□□□□ 0.95
COL9A2-204ENST00000427563 RPGRIP1Q96KN7 1286 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 ACAP3Q96P50 834 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 TCHPQ9BT92 498 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 PANK2Q9BZ23 570 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 DAXXQ9UER7 740 aaPredicted RBP20.97■□□□□ 0.95
COL9A2-204ENST00000427563 MUTYHQ9UIF7 546 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 KCNG1Q9UIX4 513 aa20.97■□□□□ 0.95
COL9A2-204ENST00000427563 SF3B1O75533 1304 aaKnown RBP eCLIP20.97■□□□□ 0.95
COL9A2-204ENST00000427563 TMEM189-UBE2V1I3L0A0 370 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 F13A1P00488 732 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 ZSCAN22P10073 491 aaPredicted RBP20.96■□□□□ 0.95
COL9A2-204ENST00000427563 MYBP10242 640 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 TNFSF9P41273 254 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 GTF2BQ00403 316 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 ITIH3Q06033 890 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 ZC2HC1CQ53FD0 456 aaPredicted RBP20.96■□□□□ 0.95
COL9A2-204ENST00000427563 TMC5Q6UXY8 1006 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 GPR65Q8IYL9 337 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 TMEM87AQ8NBN3 555 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 DDX12PQ92771 950 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 C18orf25Q96B23 403 aaPredicted RBP20.96■□□□□ 0.95
COL9A2-204ENST00000427563 CCDC39Q9UFE4 941 aa20.96■□□□□ 0.95
COL9A2-204ENST00000427563 TISP43B9A030 160 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 SPTLC2O15270 562 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 ADAM12O43184 909 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 DCXO43602 365 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 KRT18P05783 430 aaKnown RBP20.95■□□□□ 0.94
COL9A2-204ENST00000427563 SP100P23497 879 aaPredicted RBP20.95■□□□□ 0.94
COL9A2-204ENST00000427563 YARSP54577 528 aaKnown RBP20.95■□□□□ 0.94
COL9A2-204ENST00000427563 STK38Q15208 465 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 FOXD4L6Q3SYB3 417 aaPredicted RBP20.95■□□□□ 0.94
COL9A2-204ENST00000427563 FAM171A1Q5VUB5 890 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 KIAA1841Q6NSI8 718 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 LILRA6Q6PI73 481 aa20.95■□□□□ 0.94
COL9A2-204ENST00000427563 FOXD4L3Q6VB84 417 aaPredicted RBP20.95■□□□□ 0.94
COL9A2-204ENST00000427563 SFR1Q86XK3 245 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms