RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ZPBP2Q6X784 338 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 APBB1IPQ7Z5R6 666 aaPredicted RBP20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 PPFIBP1Q86W92 1011 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 KRI1Q8N9T8 703 aaKnown RBP20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 TMEM87AQ8NBN3 555 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 RASSF8Q8NHQ8 419 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 HASPINQ8TF76 798 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 FOXD4L4Q8WXT5 416 aaPredicted RBP20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 TCHPQ9BT92 498 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 PANK2Q9BZ23 570 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 PARVGQ9HBI0 331 aa20.09■□□□□ 0.81
SMARCAL1-205ENST00000425815 MYMKA6NI61 221 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 TRAK2O60296 914 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 FAM13AO94988 1023 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 WEE2P0C1S8 567 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 MCL1Q07820 350 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 SLC10A6Q3KNW5 377 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 TPRNQ4KMQ1 711 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 SEZ6Q53EL9 994 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 RRAGBQ5VZM2 374 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 SPRYD3Q8NCJ5 442 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 SNX27Q96L92 541 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 FBXL18Q96ME1 805 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 ACAP3Q96P50 834 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 POP1Q99575 1024 aaKnown RBP20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 CCDC94Q9BW85 323 aaPredicted RBP20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 GOLGA2P5Q9HBQ8 144 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 CCDC39Q9UFE4 941 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 TBX20Q9UMR3 447 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 SSX2IPQ9Y2D8 614 aa20.08■□□□□ 0.81
SMARCAL1-205ENST00000425815 ZSCAN22P10073 491 aaPredicted RBP20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 HARSP12081 509 aaKnown RBP20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 NMT1P30419 496 aaKnown RBP20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 CLCNKBP51801 687 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 ITIH3Q06033 890 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 UPP1Q16831 310 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 RTP2Q5QGT7 225 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 RARS2Q5T160 578 aaKnown RBP20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 RNF135Q8IUD6 432 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 GPR65Q8IYL9 337 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 DNAJC19Q96DA6 116 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 RPGRIP1Q96KN7 1286 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 C1QTNF1Q9BXJ1 281 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 DZANK1Q9NVP4 752 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 STK17AQ9UEE5 414 aa20.07■□□□□ 0.8
SMARCAL1-205ENST00000425815 H0YCG3 227 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 PIGRP01833 764 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 KRT18P05783 430 aaKnown RBP20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 KCNE1P15382 129 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 YARSP54577 528 aaKnown RBP20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 GTF2BQ00403 316 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 NOLC1Q14978 699 aaKnown RBP eCLIP20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 STK38Q15208 465 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 KIAA1841Q6NSI8 718 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 SLC39A4Q6P5W5 647 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 LILRA6Q6PI73 481 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 DCLRE1AQ6PJP8 1040 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 PRSS55Q6UWB4 352 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 DYMQ7RTS9 669 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 C3orf58Q8NDZ4 430 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 LNX1Q8TBB1 728 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 RIN2Q8WYP3 895 aaPredicted RBP20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 DDX12PQ92771 950 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 ZHX3Q9H4I2 956 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 POMKQ9H5K3 350 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 CNTN3Q9P232 1028 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 FNIP2Q9P278 1114 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 ANKFY1Q9P2R3 1169 aa20.06■□□□□ 0.8
SMARCAL1-205ENST00000425815 SF3B1O75533 1304 aaKnown RBP eCLIP20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 TMEM189-UBE2V1I3L0A0 370 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 K7ENM7 598 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 SPTLC2O15270 562 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 CLDN3O15551 220 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 FAM189A1O60320 539 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 PPP6R2O75170 966 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 RPL17P18621 184 aaKnown RBP20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 ZC2HC1CQ53FD0 456 aaPredicted RBP20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 FAM171A1Q5VUB5 890 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 TMC5Q6UXY8 1006 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 C18orf25Q96B23 403 aaPredicted RBP20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 ZNF396Q96N95 335 aaPredicted RBP20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 CLSTN3Q9BQT9 956 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 TTPALQ9BTX7 342 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 STRA6Q9BX79 667 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 TOPORSQ9NS56 1045 aaPredicted RBP20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 MUTYHQ9UIF7 546 aa20.05■□□□□ 0.8
SMARCAL1-205ENST00000425815 FAM86C2PA6NEL3 165 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 DCXO43602 365 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 GPR37L1O60883 481 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 B3GAT3O94766 335 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 F13A1P00488 732 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 ADH1AP07327 375 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 SPATA31D3P0C874 917 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 MYBP10242 640 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 ALADP13716 330 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 FOXD4L6Q3SYB3 417 aaPredicted RBP20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 ZBTB41Q5SVQ8 909 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 CES5AQ6NT32 575 aa20.04■□□□□ 0.8
SMARCAL1-205ENST00000425815 FOXD4L3Q6VB84 417 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms