RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PNMA8AQ86V59 439 aaPredicted RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 AGAP11Q8TF27 550 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 DDX1Q92499 740 aaKnown RBP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 ZNF653Q96CK0 615 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 LXNQ9BS40 222 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 ZNF577Q9BSK1 485 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 TMEM8AQ9HCN3 771 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 TXLNGQ9NUQ3 528 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 FGFR1OP2Q9NVK5 253 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 NKIRAS1Q9NYS0 192 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 SENP1Q9P0U3 644 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 EXOC7Q9UPT5 735 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.26■□□□□ 0.19
C9orf3-204ENST00000424143 STARD13Q9Y3M8 1113 aa16.26■□□□□ 0.19
C9orf3-204ENST00000424143 SMIM23A6NLE4 172 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 TMEM110-MUSTN1A8MSY1 372 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 POLRMTO00411 1230 aaKnown RBP16.25■□□□□ 0.19
C9orf3-204ENST00000424143 IGF2BP3O00425 579 aaKnown RBP eCLIP16.25■□□□□ 0.19
C9orf3-204ENST00000424143 BRAFP15056 766 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 SLCO1A2P46721 670 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 IFNAR2P48551 515 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 SCNN1DP51172 638 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 STAT2P52630 851 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 NCKAP1LP55160 1127 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 DLG4P78352 724 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 LACTBP83111 547 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-204ENST00000424143 GHRHRQ02643 423 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 CLEC16AQ2KHT3 1053 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 STRIP1Q5VSL9 837 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 NUGGCQ68CJ6 796 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 KRT39Q6A163 491 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 USP37Q86T82 979 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 KSR1Q8IVT5 923 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 CCDC89Q8N998 374 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 HELQQ8TDG4 1101 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 CHURC1Q8WUH1 139 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
C9orf3-204ENST00000424143 WRAP73Q9P2S5 460 aaPredicted RBP16.25■□□□□ 0.19
C9orf3-204ENST00000424143 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 ATF2P15336 505 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 NPR1P16066 1061 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 ALDH1B1P30837 517 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 MSH2P43246 934 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 GCLMP48507 274 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 IL9RQ01113 521 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 IKQ13123 557 aaPredicted RBP16.24■□□□□ 0.19
C9orf3-204ENST00000424143 LONRF1Q17RB8 773 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 AGGF1Q8N302 714 aaeCLIP16.24■□□□□ 0.19
C9orf3-204ENST00000424143 SAMD3Q8N6K7 520 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 NSMCE1Q8WV22 266 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 INPP5DQ92835 1189 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 STAMBPL1Q96FJ0 436 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 FBXL18Q96ME1 805 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 DDX23Q9BUQ8 820 aaKnown RBP16.24■□□□□ 0.19
C9orf3-204ENST00000424143 NINJ2Q9NZG7 142 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 CTNNAL1Q9UBT7 734 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 ASIC3Q9UHC3 531 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 ANAPC5Q9UJX4 755 aa16.24■□□□□ 0.19
C9orf3-204ENST00000424143 IPO5O00410 1097 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ZBTB39O15060 712 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 PRPF4O43172 522 aaKnown RBP eCLIP16.23■□□□□ 0.192e-7■■■■□ 25.5
C9orf3-204ENST00000424143 CYP26A1O43174 497 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 PSTPIP1O43586 416 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 UNC5CO95185 931 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 TAC1P20366 129 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 STX2P32856 288 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 KCNJ1P48048 391 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 YARSP54577 528 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 KCNJ2P63252 427 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ATP11AP98196 1134 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 GCNT1Q02742 428 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 TNIP1Q15025 636 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 CCDC142Q17RM4 750 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 UBAP2Q5T6F2 1119 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 DRICH1Q6PGQ1 229 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ANKS1BQ7Z6G8 1248 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 APLFQ8IW19 511 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 BANK1Q8NDB2 785 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 PLEKHO2Q8TD55 490 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 FBF1Q8TES7 1133 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 MAML1Q92585 1016 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 TTC25Q96NG3 672 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 NT5C1BQ96P26 610 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ARHGEF10LQ9HCE6 1279 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 HERC5Q9UII4 1024 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 TMX2Q9Y320 296 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ZNF646O15015 1829 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ANKRD31Q8N7Z5 1873 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 CLDN3O15551 220 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 THAP12O43422 761 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 HNRNPCL1O60812 293 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 LUC7L3O95232 432 aaKnown RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 ITGA8P53708 1063 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 BPIFB4P59827 614 aa16.23■□□□□ 0.19
C9orf3-204ENST00000424143 KLF1Q13351 362 aaPredicted RBP16.23■□□□□ 0.19
C9orf3-204ENST00000424143 MPP2Q14168 576 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms