RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 C3orf58Q8NDZ4 430 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 LARP4BQ92615 738 aaKnown RBP16.97■□□□□ 0.31
SPC24-201ENST00000423327 RPGRIP1Q96KN7 1286 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 SNX27Q96L92 541 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 FBXL18Q96ME1 805 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
SPC24-201ENST00000423327 LRFN3Q9BTN0 628 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 EMILIN2Q9BXX0 1053 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 DZANK1Q9NVP4 752 aa16.97■□□□□ 0.31
SPC24-201ENST00000423327 MORC2Q9Y6X9 1032 aaPredicted RBP16.97■□□□□ 0.31
SPC24-201ENST00000423327 MTCL1Q9Y4B5 1905 aaKnown RBP16.96■□□□□ 0.31
SPC24-201ENST00000423327 SMIM28A0A1B0GU29 152 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 GPR37L1O60883 481 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 NR1I2O75469 434 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 MCF2P10911 925 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
SPC24-201ENST00000423327 SP100P23497 879 aaPredicted RBP16.96■□□□□ 0.31
SPC24-201ENST00000423327 KLRC2P26717 231 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 NASPP49321 788 aaPredicted RBP16.96■□□□□ 0.31
SPC24-201ENST00000423327 ITIH3Q06033 890 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 SEZ6Q53EL9 994 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 ANKFY1Q9P2R3 1169 aa16.96■□□□□ 0.31
SPC24-201ENST00000423327 SF3B1O75533 1304 aaKnown RBP eCLIP16.96■□□□□ 0.39e-6■■■■■ 68.9
SPC24-201ENST00000423327 TOM1L1O75674 476 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 HARSP12081 509 aaKnown RBP16.95■□□□□ 0.3
SPC24-201ENST00000423327 CLCNKBP51801 687 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 SMTNP53814 917 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 MCL1Q07820 350 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 NOLC1Q14978 699 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPC24-201ENST00000423327 USP41Q3LFD5 358 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 HERC4Q5GLZ8 1057 aaPredicted RBP16.95■□□□□ 0.3
SPC24-201ENST00000423327 KIAA1841Q6NSI8 718 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 PRSS55Q6UWB4 352 aaPredicted RBP16.95■□□□□ 0.3
SPC24-201ENST00000423327 TMC5Q6UXY8 1006 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 PPFIBP1Q86W92 1011 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
SPC24-201ENST00000423327 ZSCAN16Q9H4T2 348 aaPredicted RBP16.95■□□□□ 0.3
SPC24-201ENST00000423327 MAN1C1Q9NR34 630 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 CNTN3Q9P232 1028 aa16.95■□□□□ 0.3
SPC24-201ENST00000423327 LARSQ9P2J5 1176 aaKnown RBP16.95■□□□□ 0.3
SPC24-201ENST00000423327 TMEM189-UBE2V1I3L0A0 370 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 K7ENM7 598 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 FAM189A1O60320 539 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 TADA2AO75478 443 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 MYBP10242 640 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 COL9A1P20849 921 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 DDIT3P35638 169 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 STRN3Q13033 797 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 PKP1Q13835 747 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 UPP1Q16831 310 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 TMEM31Q5JXX7 168 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 ZPBP2Q6X784 338 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 GLYCTKQ8IVS8 523 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 GPR65Q8IYL9 337 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 TMEM87AQ8NBN3 555 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 LINC00301Q8NCQ3 95 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 RASSF8Q8NHQ8 419 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 RIN2Q8WYP3 895 aaPredicted RBP16.94■□□□□ 0.3
SPC24-201ENST00000423327 SFXN1Q9H9B4 322 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 PARVGQ9HBI0 331 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 FNIP2Q9P278 1114 aa16.94■□□□□ 0.3
SPC24-201ENST00000423327 C2CD4DB7Z1M9 353 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 FAM13AO94988 1023 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 PIGRP01833 764 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 ADH1AP07327 375 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 ALADP13716 330 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 NMT1P30419 496 aaKnown RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 SLC10A6Q3KNW5 377 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 ZBTB41Q5SVQ8 909 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 LILRA6Q6PI73 481 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 APBB1IPQ7Z5R6 666 aaPredicted RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 MYCT1Q8N699 235 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 LNX1Q8TBB1 728 aaPredicted RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 PIK3R5Q8WYR1 880 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 STK17AQ9UEE5 414 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 DAXXQ9UER7 740 aaPredicted RBP16.93■□□□□ 0.3
SPC24-201ENST00000423327 TBX20Q9UMR3 447 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 SSX2IPQ9Y2D8 614 aa16.93■□□□□ 0.3
SPC24-201ENST00000423327 DOCK6Q96HP0 2047 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 MYMKA6NI61 221 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 ADAM12O43184 909 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 TGM5O43548 720 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 TRAK2O60296 914 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 GLUD1P00367 558 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 SPATA31D3P0C874 917 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 CXCL8P10145 99 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 KCNE1P15382 129 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 TNFSF9P41273 254 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 MTHFRP42898 656 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 BRCC3P46736 316 aa16.92■□□□□ 0.3
SPC24-201ENST00000423327 YARSP54577 528 aaKnown RBP16.92■□□□□ 0.3
SPC24-201ENST00000423327 FAM171A1Q5VUB5 890 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms