RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 HCFC2Q9Y5Z7 792 aa24.01■■□□□ 1.43
TRAF4-204ENST00000422344 TADA2AO75478 443 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 HARSP12081 509 aaKnown RBP24■■□□□ 1.43
TRAF4-204ENST00000422344 HOXB8P17481 243 aaPredicted RBP24■■□□□ 1.43
TRAF4-204ENST00000422344 GRM5P41594 1212 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 NCKAP1LP55160 1127 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 OSTNP61366 133 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 KCNC3Q14003 757 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 PPFIBP1Q86W92 1011 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 BICD1Q96G01 975 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 PTPRHQ9HD43 1115 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 ANKFY1Q9P2R3 1169 aa24■■□□□ 1.43
TRAF4-204ENST00000422344 CASTOR2A6NHX0 329 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 K7ENM7 598 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 C2CD2LO14523 706 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 PTGESO14684 152 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 ZSCAN22P10073 491 aaPredicted RBP23.99■■□□□ 1.43
TRAF4-204ENST00000422344 SCP2P22307 547 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 MATR3P43243 847 aaKnown RBP eCLIP23.99■■□□□ 1.43
TRAF4-204ENST00000422344 GLUD2P49448 558 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 HSP90AA2PQ14568 343 aaPredicted RBP23.99■■□□□ 1.43
TRAF4-204ENST00000422344 TPRNQ4KMQ1 711 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 ZPBP2Q6X784 338 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 CCDC73Q6ZRK6 1079 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 HAUS6Q7Z4H7 955 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 SUSD6Q92537 303 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 RABGGTAQ92696 567 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 TFIP11Q9UBB9 837 aaKnown RBP23.99■■□□□ 1.43
TRAF4-204ENST00000422344 ADAM28Q9UKQ2 775 aa23.99■■□□□ 1.43
TRAF4-204ENST00000422344 F8W810 466 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 SPTLC2O15270 562 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 TOM1L1O75674 476 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 PROZP22891 400 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 KLRC2P26717 231 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 PTPN5P54829 565 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 FUT10Q6P4F1 479 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 FBXL6Q8N531 539 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 CEP120Q8N960 986 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 LINC00301Q8NCQ3 95 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 APOL5Q9BWW9 433 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 DZANK1Q9NVP4 752 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 MYH15Q9Y2K3 1946 aa23.98■■□□□ 1.43
TRAF4-204ENST00000422344 SPDYE4A6NLX3 237 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 TRAK2O60296 914 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 SF3B1O75533 1304 aaKnown RBP eCLIP23.97■■□□□ 1.433e-6■■■■□ 20.7
TRAF4-204ENST00000422344 F13A1P00488 732 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 ABCD1P33897 745 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 STAT6P42226 847 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 ZNF131P52739 623 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 SIGLEC14Q08ET2 396 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 NOLC1Q14978 699 aaKnown RBP eCLIP23.97■■□□□ 1.43
TRAF4-204ENST00000422344 GLRA4Q5JXX5 417 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 SV2BQ7L1I2 683 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 ACAP3Q96P50 834 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 KLHL5Q96PQ7 755 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 CACNG4Q9UBN1 327 aa23.97■■□□□ 1.43
TRAF4-204ENST00000422344 CLDN3O15551 220 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 BRD1O95696 1058 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 CNPP09543 421 aaKnown RBP23.96■■□□□ 1.43
TRAF4-204ENST00000422344 LIG4P49917 911 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 USP41Q3LFD5 358 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 FOXD4L6Q3SYB3 417 aaPredicted RBP23.96■■□□□ 1.43
TRAF4-204ENST00000422344 CES5AQ6NT32 575 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 SYCE2Q6PIF2 218 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 FOXD4L3Q6VB84 417 aaPredicted RBP23.96■■□□□ 1.43
TRAF4-204ENST00000422344 TAS1R1Q7RTX1 841 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 ZBTB45Q96K62 511 aaPredicted RBP23.96■■□□□ 1.43
TRAF4-204ENST00000422344 PRRX2Q99811 253 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 S1PR5Q9H228 398 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 CXCL16Q9H2A7 254 aa23.96■■□□□ 1.43
TRAF4-204ENST00000422344 HNRNPDLO14979 420 aaKnown RBP23.95■■□□□ 1.42
TRAF4-204ENST00000422344 PPP6R2O75170 966 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 YEATS4O95619 227 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 ADH1AP07327 375 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 EPCAMP16422 314 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 DSG1Q02413 1049 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 DYMQ7RTS9 669 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 RNF168Q8IYW5 571 aaPredicted RBP23.95■■□□□ 1.42
TRAF4-204ENST00000422344 HASPINQ8TF76 798 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 SLC22A17Q8WUG5 538 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 PPP1R10Q96QC0 940 aaKnown RBP23.95■■□□□ 1.42
TRAF4-204ENST00000422344 PAAF1Q9BRP4 392 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 PANK2Q9BZ23 570 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 GPR62Q9BZJ7 368 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 SLC38A7Q9NVC3 462 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 TBX20Q9UMR3 447 aa23.95■■□□□ 1.42
TRAF4-204ENST00000422344 KMT2EQ8IZD2 1858 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 USP34Q70CQ2 3546 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 SMIM28A0A1B0GU29 152 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 ABLIM1O14639 778 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 LILRB3O75022 631 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 KIF4AO95239 1232 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 EFEMP2O95967 443 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 SP100P23497 879 aaPredicted RBP23.94■■□□□ 1.42
TRAF4-204ENST00000422344 TCF15Q12870 199 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 NAB2Q15742 525 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 KIAA0319Q5VV43 1072 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 KCNN1Q92952 543 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 ASIC4Q96FT7 647 aa23.94■■□□□ 1.42
TRAF4-204ENST00000422344 SNX27Q96L92 541 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms