RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 UPF1Q92900 1129 aaKnown RBP eCLIP15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 RNPC3Q96LT9 517 aaKnown RBP15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MMP19Q99542 508 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PAGR1Q9BTK6 254 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SMARCAD1Q9H4L7 1026 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 FAM114A2Q9NRY5 505 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 RASAL2Q9UJF2 1139 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ADAM21Q9UKJ8 722 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CNTN6Q9UQ52 1028 aa15.62■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PLXNA1Q9UIW2 1896 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 DDX3YO15523 660 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CLDN3O15551 220 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SART1O43290 800 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 C4BPAP04003 597 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CHRNB2P17787 502 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CTNNA2P26232 953 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SLC1A1P43005 524 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 GUCY2DQ02846 1103 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CAPSQ13938 189 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TTLL4Q14679 1199 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MAPK6Q16659 721 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SEL1L2Q5TEA6 688 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ACAD10Q6JQN1 1059 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TRMT1LQ7Z2T5 733 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ABRAQ8N0Z2 381 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 DDX1Q92499 740 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PCYT2Q99447 389 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 GPR20Q99678 358 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SH3GL2Q99962 352 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZSWIM1Q9BR11 485 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 FHDC1Q9C0D6 1143 aaPredicted RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 FAM124BQ9H5Z6 455 aaPredicted RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 EPB41L5Q9HCM4 733 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 UTP11Q9Y3A2 253 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ALG6Q9Y672 507 aa15.61■□□□□ 0.09
HLA-DPA1-242ENST00000419277 FAM187AA6NFU0 413 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 POLR3GO15318 223 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 RAD51CO43502 376 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 HBP1O60381 514 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 RNF40O75150 1001 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SGPL1O95470 568 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 GLI1P08151 1106 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 EPHX2P34913 555 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CTNNA1P35221 906 aaKnown RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CLEC16AQ2KHT3 1053 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PNMA8AQ86V59 439 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SLC47A2Q86VL8 602 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PALB2Q86YC2 1186 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CD302Q8IX05 232 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZSWIM2Q8NEG5 633 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZNF564Q8TBZ8 553 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 HDAC7Q8WUI4 952 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MAIP1Q8WWC4 291 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TMEM143Q96AN5 459 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ARHGEF26Q96DR7 871 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CCDC113Q9H0I3 377 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 EHD2Q9NZN4 543 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 VPS18Q9P253 973 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 COL1A2P08123 1366 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 HLA-DRAP01903 254 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CHRNA3P32297 505 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 DNA2P51530 1060 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 DRG2P55039 364 aaKnown RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SOX10P56693 466 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 YWHAEP62258 255 aaKnown RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CENPCQ03188 943 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 BIRC3Q13489 604 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CUL2Q13617 745 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TTLL12Q14166 644 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 KYAT1Q16773 422 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZNF467Q7Z7K2 595 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 GLG1Q92896 1179 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZNF653Q96CK0 615 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 OPTNQ96CV9 577 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ST7Q9NRC1 585 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TAS2R14Q9NYV8 317 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MTUS1Q9ULD2 1270 aa15.6■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PLXNB2O15031 1838 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 OGTO15294 1046 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ZMYND10O75800 440 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ERLIN2O94905 339 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 FGGP02679 453 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 KRT5P13647 590 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MAN1A1P33908 653 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 NLRP11P59045 1033 aaKnown RBP15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 ERVK-9P63128 1117 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 SLC7A5Q01650 507 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MCL1Q07820 350 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 IRF5Q13568 498 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 LDLRAD1Q5T700 205 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TAF3Q5VWG9 929 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 TDRD10Q5VZ19 366 aaKnown RBP15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 CCDC62Q6P9F0 684 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 DHX37Q8IY37 1157 aaKnown RBP15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 EMID1Q96A84 441 aaPredicted RBP15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 MRPL47Q9HD33 250 aaKnown RBP15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 VTA1Q9NP79 307 aa15.59■□□□□ 0.09
HLA-DPA1-242ENST00000419277 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms