RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 NLGN4XQ8N0W4 816 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 CARNMT1Q8N4J0 409 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 GLIS1Q8NBF1 620 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 OR8H1Q8NGG4 311 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 OR14C36Q8NHC7 312 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 CCDC47Q96A33 483 aaKnown RBP4.89□□□□□ -1.63
RFC4-205ENST00000418288 TBC1D31Q96DN5 1066 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 SUCLG2Q96I99 432 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 COX4I2Q96KJ9 171 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 SNX22Q96L94 193 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 MRGPRX4Q96LA9 322 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 TWNKQ96RR1 684 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 EIF2AQ9BY44 585 aaKnown RBP4.89□□□□□ -1.63
RFC4-205ENST00000418288 TRIM54Q9BYV2 358 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 RNF208Q9H0X6 261 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 ASCC2Q9H1I8 757 aaPredicted RBP4.89□□□□□ -1.63
RFC4-205ENST00000418288 SEMA6BQ9H3T3 888 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 CXorf56Q9H5V9 222 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 GREM2Q9H772 168 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 SPON1Q9HCB6 807 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 SLC6A20Q9NP91 592 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 ABCF3Q9NUQ8 709 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 AP5S1Q9NUS5 200 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 ABCF2Q9UG63 623 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 CPA4Q9UI42 421 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 SYNPO2Q9UMS6 1093 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 CNPY2Q9Y2B0 182 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 DAGLAQ9Y4D2 1042 aa4.89□□□□□ -1.63
RFC4-205ENST00000418288 ST20-MTHFSA0A0A6YYL1 179 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 C17orf113A0A1B0GUU1 675 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 TRIM43BA6NCK2 446 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 PI4K2BG5E9Z4 385 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ASNA1O43681 348 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 PRLP01236 227 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 HNRNPA1P09651 372 aaKnown RBP eCLIP4.88□□□□□ -1.63
RFC4-205ENST00000418288 PTPN1P18031 435 aaKnown RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 CYP7A1P22680 504 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 CHMP24386 653 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 GJA4P35212 333 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 FLT3LGP49771 235 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 IFI35P80217 286 aaPredicted RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 PPARAQ07869 468 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ACVR2BQ13705 512 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 TARBP2Q15633 366 aaKnown RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 ARHGAP15Q53QZ3 475 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ANKRD45Q5TZF3 282 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 FBXO38Q6PIJ6 1188 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 MFSD6Q6ZSS7 791 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 TMTC3Q6ZXV5 915 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 KCTD1Q719H9 257 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 CHD1LQ86WJ1 897 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ZFPM1Q8IX07 1006 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 NGEFQ8N5V2 710 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 NAT8LQ8N9F0 302 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ZNF384Q8TF68 577 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 RSAD2Q8WXG1 361 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ASB15Q8WXK1 588 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 RUBCNQ92622 972 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 TRIM43Q96BQ3 446 aaPredicted RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 HIC2Q96JB3 615 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 COG8Q96MW5 612 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 SPAG5Q96R06 1193 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 DESI2Q9BSY9 194 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 GPR63Q9BZJ6 419 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 TWSG1Q9GZX9 223 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 SMURF2Q9HAU4 748 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 SACM1LQ9NTJ5 587 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ADD3Q9UEY8 706 aaKnown RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 GGA1Q9UJY5 639 aa4.88□□□□□ -1.63
RFC4-205ENST00000418288 ZHX1Q9UKY1 873 aaPredicted RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 SOS1Q07889 1333 aaPredicted RBP4.88□□□□□ -1.63
RFC4-205ENST00000418288 A0A087WZ62 844 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 GOLGA6L22H0YM25 854 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 NPHS1O60500 1241 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 PPP1R11O60927 126 aaPredicted RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 COBLO75128 1261 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 GJB3O75712 270 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 FSBPO95073 299 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 SCGB1D1O95968 90 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 TK1P04183 234 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 KRT1P04264 644 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 SYPP08247 313 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 MMEP08473 750 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 CLTBP09497 229 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 IL1R1P14778 569 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 GSPT1P15170 499 aaKnown RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 TGM1P22735 817 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 KIR3DL1P43629 444 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 MRE11P49959 708 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 CCT4P50991 539 aaKnown RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 ARF3P61204 181 aaPredicted RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 ARF1P84077 181 aaKnown RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 TEKQ02763 1124 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 TARDBPQ13148 414 aaKnown RBP eCLIP4.87□□□□□ -1.631e-6■■■■□ 22.1
RFC4-205ENST00000418288 COL9A3Q14050 684 aaPredicted RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 RASA2Q15283 850 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 AOC3Q16853 763 aa4.87□□□□□ -1.63
RFC4-205ENST00000418288 KHDC1Q4VXA5 237 aaKnown RBP4.87□□□□□ -1.63
RFC4-205ENST00000418288 TTC38Q5R3I4 469 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms