RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ACOT2P49753 483 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 SCFD1Q8WVM8 642 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 HIST1H2AHQ96KK5 128 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 HIST1H2AJQ99878 128 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 H2AFJQ9BTM1 129 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
PTCH1-205ENST00000418258 TMED1Q13445 227 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 RNF180Q86T96 592 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 MED15Q96RN5 788 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 RGL1Q9NZL6 768 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 SNX9Q9Y5X1 595 aa11.84□□□□□ -0.51
PTCH1-205ENST00000418258 CCL15-CCL14A0A0B4J2E2 113 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 POLRMTO00411 1230 aaKnown RBP11.83□□□□□ -0.51
PTCH1-205ENST00000418258 GGPS1O95749 300 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 EIF3EP60228 445 aaKnown RBP11.83□□□□□ -0.51
PTCH1-205ENST00000418258 NFIXQ14938 502 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 CCL15Q16663 113 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 DGKDQ16760 1214 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 ZCWPW1Q9H0M4 648 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 SNX5Q9Y5X3 404 aa11.83□□□□□ -0.51
PTCH1-205ENST00000418258 ITSN1Q15811 1721 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ABCA8O94911 1581 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 LGALS16A8MUM7 142 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ZNF263O14978 683 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 LRG1P02750 347 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ORC2Q13416 577 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 NECTIN1Q15223 517 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 PCSK7Q16549 785 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 TJAP1Q5JTD0 557 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 PDXDC1Q6P996 788 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 RGS9BPQ6ZS82 235 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 NUDCD3Q8IVD9 361 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ZNF579Q8NAF0 562 aaKnown RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ZFP69BQ9UJL9 534 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 NDUFS3O75489 264 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 LARGE1O95461 756 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 TDP2O95551 362 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 SLC9A5Q14940 896 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 STRIP1Q5VSL9 837 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 C1orf146Q5VVC0 180 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 FAM47EQ6ZV65 393 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 LPAR1Q92633 364 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 MLXIPLQ9NP71 852 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 SLC38A7Q9NVC3 462 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 SLC25A13Q9UJS0 675 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 C5orf58C9J3I9 102 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 HSPA1AP0DMV8 641 aaKnown RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 HSPA1BP0DMV9 641 aaKnown RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 CEP55Q53EZ4 464 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 GNASQ5JWF2 1037 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 HAUS6Q7Z4H7 955 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 OR9Q1Q8NGQ5 310 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 TMEM60Q9H2L4 133 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 NRKQ7Z2Y5 1582 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 NPHP3-ACAD11A0A0J9YXS1 232 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 C19orf81C9J6K1 198 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 HARS2P49590 506 aaKnown RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 RGS7P49802 495 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 RBP5P82980 135 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 MFSD4BQ5TF39 518 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 C18orf8Q96DM3 657 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
PTCH1-205ENST00000418258 FAM96AQ9H5X1 160 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 CD4P01730 458 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ARSEP51690 589 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 HUNKP57058 714 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 NR1H3Q13133 447 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 SYCP2LQ5T4T6 812 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 PRAMEF18Q5VWM3 479 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 RFWD2Q8NHY2 731 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 SNF8Q96H20 258 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 PARD6BQ9BYG5 372 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 ENTPD7Q9NQZ7 604 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 GGA3Q9NZ52 723 aa11.83□□□□□ -0.52
PTCH1-205ENST00000418258 RNF103-CHMP3A0A140T963 221 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 KRT14P02533 472 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 ATP1A3P13637 1013 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 CATSPER3Q86XQ3 398 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 SH2D3AQ9BRG2 576 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 AAASQ9NRG9 546 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 TMEM161AQ9NX61 479 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-205ENST00000418258 ZNF500O60304 480 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-205ENST00000418258 ABTB1Q969K4 478 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-205ENST00000418258 CRB1P82279 1406 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 APRTP07741 180 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 TRIM49P0CI25 452 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 TRIM49CP0CI26 452 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 AKR1B1P15121 316 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 LRRC8EQ6NSJ5 796 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 LATS2Q9NRM7 1088 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 KLHL11Q9NVR0 708 aa11.82□□□□□ -0.52
PTCH1-205ENST00000418258 PKP3Q9Y446 797 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms