RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NYAP1Q6ZVC0 841 aa12.71□□□□□ -0.37
UBR4-205ENST00000417040 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
UBR4-205ENST00000417040 REXO1L1PQ8IX06 675 aa12.71□□□□□ -0.37
UBR4-205ENST00000417040 SCG3Q8WXD2 468 aaKnown RBP12.71□□□□□ -0.37
UBR4-205ENST00000417040 DDX56Q9NY93 547 aaKnown RBP12.71□□□□□ -0.37
UBR4-205ENST00000417040 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.38
UBR4-205ENST00000417040 KCNA2P16389 499 aa12.71□□□□□ -0.38
UBR4-205ENST00000417040 KRT33BQ14525 404 aa12.71□□□□□ -0.38
UBR4-205ENST00000417040 SLC29A2Q14542 456 aa12.71□□□□□ -0.38
UBR4-205ENST00000417040 BARGINQ6ZT62 677 aa12.71□□□□□ -0.38
UBR4-205ENST00000417040 FAM96AQ9H5X1 160 aa12.71□□□□□ -0.38
UBR4-205ENST00000417040 WBP4O75554 376 aaKnown RBP12.7□□□□□ -0.38
UBR4-205ENST00000417040 LDHAP00338 332 aaKnown RBP12.7□□□□□ -0.38
UBR4-205ENST00000417040 STX3Q13277 289 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 PLD3Q8IV08 490 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 CCT7Q99832 543 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 SIK2Q9H0K1 926 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 PLEKHG1Q9ULL1 1385 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 SDC4P31431 198 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 TAS2R42Q7RTR8 314 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 DGKHQ86XP1 1220 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 JAMLQ86YT9 394 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 USP33Q8TEY7 942 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 ULK4Q96C45 1275 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 IL25Q9H293 177 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 GABBR1Q9UBS5 961 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 FAM47DPA6NHR8 397 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 DNAJC3Q13217 504 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 PTK7Q13308 1070 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 RCN1Q15293 331 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 EXOC8Q8IYI6 725 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 CLEC4FQ8N1N0 589 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
UBR4-205ENST00000417040 SLC9A1P19634 815 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 EXOSC10Q01780 885 aaKnown RBP12.7□□□□□ -0.38
UBR4-205ENST00000417040 SURF1Q15526 300 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 PBXIP1Q96AQ6 731 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 PKD2L2Q9NZM6 624 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 APRTP07741 180 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 MRPL28Q13084 256 aaKnown RBP12.7□□□□□ -0.38
UBR4-205ENST00000417040 ARHGAP27Q6ZUM4 889 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 PID1Q7Z2X4 250 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 SCN4BQ8IWT1 228 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 OR6P1Q8NGX9 317 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 MCEEQ96PE7 176 aa12.7□□□□□ -0.38
UBR4-205ENST00000417040 DCP1AQ9NPI6 582 aaPredicted RBP12.7□□□□□ -0.38
UBR4-205ENST00000417040 ZBTB39O15060 712 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 SMTNL2Q2TAL5 461 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 EPC2Q52LR7 807 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 GUF1Q8N442 669 aaKnown RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 OLFML3Q9NRN5 406 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 GIMAP4Q9NUV9 329 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 PSD3Q9NYI0 1048 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 FRMD5Q7Z6J6 570 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 ZNF555Q8NEP9 628 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 TEKT4Q8WW24 435 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 PIGBQ92521 554 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 ELMO2Q96JJ3 720 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 SLAIN2Q9P270 581 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 MOSPD1Q9UJG1 213 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 PSMD14O00487 310 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 FAM107AO95990 144 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 CHI3L2Q15782 390 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 KCNB2Q92953 911 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 RMDN3Q96TC7 470 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 MANSC1Q9H8J5 431 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 NDFIP2Q9NV92 336 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 PSMC3IPQ9P2W1 217 aaPredicted RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 LRFN2Q9ULH4 789 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 CFAP74Q9C0B2 1584 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 PRDM15P57071 1507 aaPredicted RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 ZNF609O15014 1411 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 AP5Z1O43299 807 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 MYL3P08590 195 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 TMED10P49755 219 aaKnown RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 ERVK-24P63145 666 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 DCAF4L1Q3SXM0 396 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 ADSSL1Q8N142 457 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 DCAF4Q8WV16 495 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 FUT8Q9BYC5 575 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 ATP7BP35670 1465 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 ITIH6Q6UXX5 1313 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 ASAP2O43150 1006 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 SCTRP47872 440 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 RGS7P49802 495 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 CCDC15Q0P6D6 951 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 STK4Q13043 487 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 C3orf62Q6ZUJ4 267 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 C11orf74Q86VG3 221 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 RUBCNQ92622 972 aa12.69□□□□□ -0.38
UBR4-205ENST00000417040 PAIP2BQ9ULR5 123 aaKnown RBP12.69□□□□□ -0.38
UBR4-205ENST00000417040 ATP8B3O60423 1300 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 ANGPT2O15123 496 aa12.68□□□□□ -0.38
UBR4-205ENST00000417040 KRT7P08729 469 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms