RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 FAXDC2Q96IV6 333 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 FAM81BQ96LP2 452 aa10.48□□□□□ -0.73
CD44-206ENST00000415148 DNAJC17Q9NVM6 304 aaKnown RBP10.48□□□□□ -0.73
CD44-206ENST00000415148 TCEA3O75764 348 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 QARSP47897 775 aaKnown RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 RARRES1P49788 294 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 CLNS1AP54105 237 aaKnown RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 NCKAP1LP55160 1127 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 NCALDP61601 193 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 RIPK1Q13546 671 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 MPP2Q14168 576 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 KRT39Q6A163 491 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 SEPT14Q6ZU15 432 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 TRPM8Q7Z2W7 1104 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 EXOC3L1Q86VI1 746 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 ZSWIM2Q8NEG5 633 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 TMC2Q8TDI7 906 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 GRK7Q8WTQ7 553 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 PSPC1Q8WXF1 523 aaKnown RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 KAT5Q92993 513 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 KREMEN1Q96MU8 473 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 PWWP2AQ96N64 755 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 PLCD4Q9BRC7 762 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 CBWD1Q9BRT8 395 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 ZHX2Q9Y6X8 837 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 AFF2P51816 1311 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 DHX15O43143 795 aaKnown RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 CYP26A1O43174 497 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 GH1P01241 217 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 CYP11B1P15538 503 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 SLC1A1P43005 524 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 ALDH5A1P51649 535 aaPredicted RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 UBXN2AP68543 259 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 RHBDF2Q6PJF5 856 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
CD44-206ENST00000415148 ENOSF1Q7L5Y1 443 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 USP37Q86T82 979 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 CCDC25Q86WR0 208 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 LDHDQ86WU2 507 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 SAMD3Q8N6K7 520 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 GBP7Q8N8V2 638 aaPredicted RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 PLEKHO2Q8TD55 490 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 NSMCE1Q8WV22 266 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 ATP6V0A4Q9HBG4 840 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 TMEM8AQ9HCN3 771 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 KCNH7Q9NS40 1196 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 FGFR1OP2Q9NVK5 253 aa10.47□□□□□ -0.73
CD44-206ENST00000415148 MAP3K20Q9NYL2 800 aaKnown RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 COL11A2P13942 1736 aaPredicted RBP10.47□□□□□ -0.73
CD44-206ENST00000415148 CCDC189A1A4V9 331 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 SNX3O60493 162 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 OAS1P00973 400 aaKnown RBP10.46□□□□□ -0.73
CD44-206ENST00000415148 ITGB5P18084 799 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 CHKAP35790 457 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 GHRHRQ02643 423 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 PTK6Q13882 451 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 CRELD2Q6UXH1 353 aaPredicted RBP10.46□□□□□ -0.73
CD44-206ENST00000415148 SLC47A2Q86VL8 602 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 C4orf19Q8IY42 314 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 PPM1KQ8N3J5 372 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 ANKLE1Q8NAG6 615 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 HELQQ8TDG4 1101 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 ACER1Q8TDN7 264 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 ZNF653Q96CK0 615 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 SNF8Q96H20 258 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 PRMT6Q96LA8 375 aaPredicted RBP10.46□□□□□ -0.73
CD44-206ENST00000415148 AAASQ9NRG9 546 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 TBC1D22BQ9NU19 505 aa10.46□□□□□ -0.73
CD44-206ENST00000415148 EIF4E1BA6NMX2 242 aaKnown RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 TCP11X1B4DZS4 312 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 ZC3H11AO75152 810 aaKnown RBP eCLIP10.46□□□□□ -0.74
CD44-206ENST00000415148 ANP32DO95626 131 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 CALCAP01258 141 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 KRT16P08779 473 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 MYBL1P10243 752 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 EZRP15311 586 aaKnown RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 ADCY1Q08828 1119 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 PTP4A2Q12974 167 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 MKRN3Q13064 507 aaKnown RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 STYK1Q6J9G0 422 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 CGB2Q6NT52 195 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 VSTM1Q6UX27 236 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 BBOF1Q8ND07 529 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 PARD3BQ8TEW8 1205 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 FAM151AQ8WW52 585 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 DDX1Q92499 740 aaKnown RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 TRIM11Q96F44 468 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 ZNF570Q96NI8 536 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 NT5C1BQ96P26 610 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 CDC42EP4Q9H3Q1 356 aaKnown RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 AGO4Q9HCK5 861 aaKnown RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 AVENQ9NQS1 362 aaPredicted RBP10.46□□□□□ -0.74
CD44-206ENST00000415148 ANKEF1Q9NU02 776 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 TMOD2Q9NZR1 351 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 UBIAD1Q9Y5Z9 338 aa10.46□□□□□ -0.74
CD44-206ENST00000415148 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 O00370 1275 aa10.45□□□□□ -0.74
CD44-206ENST00000415148 IGF2BP3O00425 579 aaKnown RBP eCLIP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms