RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 UBXN8O00124 270 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 IRS4O14654 1257 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CAPN9O14815 690 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ERC2O15083 957 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CETN3O15182 167 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 AHCYL1O43865 530 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CEP104O60308 925 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 KCNJ13O60928 360 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 SLC22A3O75751 556 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 EPN2O95208 641 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 GOSR1O95249 250 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 HSPA4LO95757 839 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 AKR1B1P15121 316 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CPEP16870 476 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ZKSCAN1P17029 563 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CHMLP26374 656 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 MCM5P33992 734 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 NF2P35240 595 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 SOX6P35712 828 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 HADHAP40939 763 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 PSMC4P43686 418 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ATP5OP48047 213 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 SULT1E1P49888 294 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CLNS1AP54105 237 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 GPR85P60893 370 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 TGFB2P61812 414 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ETF1P62495 437 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CCNA1P78396 465 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 BASP1P80723 227 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 PPIDQ08752 370 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 AP1B1Q10567 949 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 GRIK3Q13003 919 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CDC16Q13042 620 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 PPFIA1Q13136 1202 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 IFIT5Q13325 482 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 TUBA3CQ13748 450 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ASIC2Q16515 512 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 MEA1Q16626 185 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 DDR2Q16832 855 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 C21orf62-AS1Q17RA5 79 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ZXDCQ2QGD7 858 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 LETMD1Q6P1Q0 360 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CORO6Q6QEF8 472 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 LPCAT2Q7L5N7 544 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 KRT74Q7RTS7 529 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 NUP54Q7Z3B4 507 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 HID1Q8IV36 788 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 COLGALT2Q8IYK4 626 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 SUPT20HQ8NEM7 779 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 DNAJB8Q8NHS0 232 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 XAGE3Q8WTP9 111 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ACSF2Q96CM8 615 aaPredicted RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 FAXDC2Q96IV6 333 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 NT5C1BQ96P26 610 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 TUBA1CQ9BQE3 449 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CRB3Q9BUF7 120 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 NAA15Q9BXJ9 866 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CARD11Q9BXL7 1154 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 BRD8Q9H0E9 1235 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 NSRP1Q9H0G5 558 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 WNT5BQ9H1J7 359 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 DNAJC18Q9H819 358 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 PARVGQ9HBI0 331 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 TCF7L1Q9HCS4 588 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 USP40Q9NVE5 1235 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 DDX18Q9NVP1 670 aaKnown RBP3.97□□□□□ -1.77
SF3B1-203ENST00000414174 RCAN3Q9UKA8 241 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 GPR34Q9UPC5 381 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 EFR3BQ9Y2G0 817 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 TMED5Q9Y3A6 229 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 CORINQ9Y5Q5 1042 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 SLC4A4Q9Y6R1 1079 aa3.97□□□□□ -1.77
SF3B1-203ENST00000414174 ABCC9O60706 1549 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 A0A0G2JPF8 293 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 RRN3P2A6NIE6 340 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 GOLGA8AA7E2F4 631 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 GNAT3A8MTJ3 354 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 WASH4PA8MWX3 477 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 B4DLN1 442 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 HNRNPCL3B7ZW38 293 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 H3BS24 57 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SGK1O00141 431 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 GABRDO14764 452 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TSPAN1O60635 241 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 RFPL3O75679 317 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SNUPNO95149 360 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SLC3A2P08195 630 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 HNRNPCL4P0DMR1 293 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 TOP1P11387 765 aaKnown RBP3.96□□□□□ -1.78
SF3B1-203ENST00000414174 COL6A2P12110 1019 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 PDGFRAP16234 1089 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 IFNAR2P48551 515 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 NLRP5P59047 1200 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 COG7P83436 770 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 BNIP1Q12981 228 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SGCGQ13326 291 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 MPP3Q13368 585 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 SPARCL1Q14515 664 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 STK11Q15831 433 aa3.96□□□□□ -1.78
SF3B1-203ENST00000414174 PPP2R5EQ16537 467 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms