RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 INPP5FQ9Y2H2 1132 aa6.99□□□□□ -1.29
USP54-202ENST00000413442 ZFP37Q9Y6Q3 630 aaPredicted RBP6.99□□□□□ -1.29
USP54-202ENST00000413442 COL6A3P12111 3177 aa6.99□□□□□ -1.29
USP54-202ENST00000413442 TRIP11Q15643 1979 aa6.99□□□□□ -1.29
USP54-202ENST00000413442 A0A0B4J269 797 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 FRMD3A2A2Y4 597 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 C19orf67A6NJJ6 358 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 SFI1A8K8P3 1242 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 H7C4K7 107 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 SYN3O14994 580 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 RECQL4O94761 1208 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 IL18RAPO95256 599 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 GARTP22102 1010 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 CMA1P23946 247 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 AKAP5P24588 427 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 KLRC2P26717 231 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 MLH1P40692 756 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 ME1P48163 572 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 SCNN1GP51170 649 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 ZNF568Q3ZCX4 644 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 HERC4Q5GLZ8 1057 aaPredicted RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 ANKRD54Q6NXT1 300 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 FUT10Q6P4F1 479 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 ANKS3Q6ZW76 656 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 MAP4K3Q8IVH8 894 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 GJD3Q8N144 294 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 SMRP1Q8NCR6 262 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 APPL2Q8NEU8 664 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 SLC22A17Q8WUG5 538 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 CACTINQ8WUQ7 758 aaKnown RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 TMEM174Q8WUU8 243 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 DNAJC19Q96DA6 116 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 PPP1R10Q96QC0 940 aaKnown RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 ACCSQ96QU6 501 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 C7orf25Q9BPX7 421 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 PHF7Q9BWX1 381 aaPredicted RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 STRA6Q9BX79 667 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 CDT1Q9H211 546 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 NXF3Q9H4D5 531 aaKnown RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 IGFLR1Q9H665 355 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 MRPL44Q9H9J2 332 aaKnown RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 MIOSQ9NXC5 875 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 ZDHHC7Q9NXF8 308 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 SNTG2Q9NY99 539 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 TFIP11Q9UBB9 837 aaKnown RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 DNAJB4Q9UDY4 337 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 UBQLN1Q9UMX0 589 aaKnown RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 USTQ9Y2C2 406 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 NR2E1Q9Y466 385 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 ARIH1Q9Y4X5 557 aaPredicted RBP6.98□□□□□ -1.29
USP54-202ENST00000413442 HES2Q9Y543 173 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 BACE2Q9Y5Z0 518 aa6.98□□□□□ -1.29
USP54-202ENST00000413442 FAM237AA0A1B0GTK4 181 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 A0A1W2PQ27 194 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 A0A1W2PQ64 194 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 A0A1W2PQD8 194 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 TTC26A0AVF1 554 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 MEIS3P2A8K0S8 358 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 NT5C1B-RDH14C9J2C7 533 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 ABLIM1O14639 778 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 PTGESO14684 152 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 HNRNPDLO14979 420 aaKnown RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 EIF3DO15371 548 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP54-202ENST00000413442 CLASP2O75122 1294 aaKnown RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 POU2F2P09086 479 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 HNRNPA1P09651 372 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP54-202ENST00000413442 FAM163BP0C2L3 166 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 SLFN14P0C7P3 912 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 LIG1P18858 919 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 IBSPP21815 317 aaPredicted RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 LRPAP1P30533 357 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 HOXA9P31269 272 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 IRS1P35568 1242 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 MATR3P43243 847 aaKnown RBP eCLIP6.97□□□□□ -1.29
USP54-202ENST00000413442 CEBPZQ03701 1054 aaKnown RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 PPP2R3AQ06190 1150 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 SMARCB1Q12824 385 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 CBX2Q14781 532 aaPredicted RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 PTPN14Q15678 1187 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 NAB2Q15742 525 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 ZBTB6Q15916 424 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 UPP1Q16831 310 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 AXDND1Q5T1B0 1012 aaPredicted RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 EEF1DP3Q658K8 133 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 EP400NLQ6ZTU2 488 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 TAS1R3Q7RTX0 852 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 RBM23Q86U06 439 aaKnown RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 CEP57L1Q8IYX8 460 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 VN1R2Q8NFZ6 395 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 GOLGA5Q8TBA6 731 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 PIK3R5Q8WYR1 880 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 SUSD6Q92537 303 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 STAMQ92783 540 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 CCDC47Q96A33 483 aaKnown RBP6.97□□□□□ -1.29
USP54-202ENST00000413442 BICD1Q96G01 975 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 SPATA32Q96LK8 384 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 ZFP42Q96MM3 310 aa6.97□□□□□ -1.29
USP54-202ENST00000413442 KLHL5Q96PQ7 755 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms