RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 GNA11P29992 359 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RRM2P31350 389 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TAF6P49848 677 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PEX5P50542 639 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CDH6P55285 790 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 DNM1Q05193 864 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CCNYL2Q5T2Q4 361 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HIST2H2AA3Q6FI13 130 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TTC6Q86TZ1 520 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CYP4Z1Q86W10 505 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 LRRC8AQ8IWT6 810 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 IZUMO1Q8IYV9 350 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TDRD7Q8NHU6 1098 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 INPP5DQ92835 1189 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SMYD3Q9H7B4 428 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PDE11AQ9HCR9 933 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 USP40Q9NVE5 1235 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ARHGEF38Q9NXL2 777 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 INVSQ9Y283 1065 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CSADQ9Y600 493 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 M0R129 80 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SLC33A1O00400 549 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ENC1O14682 589 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MEFVO15553 781 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TIMM44O43615 452 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SIN3BO75182 1162 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TOM1L1O75674 476 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RPS6KA4O75676 772 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PRKAR2AP13861 404 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 DARSP14868 501 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ATF3P18847 181 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RAB4AP20338 218 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 NR1H3Q13133 447 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MXD4Q14582 209 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PPM1LQ5SGD2 360 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HSDL2Q6YN16 418 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 DHX58Q96C10 678 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SNX27Q96L92 541 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TMEM68Q96MH6 324 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 MTA3Q9BTC8 594 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SYT4Q9H2B2 425 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SYNDIG1Q9H7V2 258 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 AKAP7Q9P0M2 348 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 POFUT2Q9Y2G5 429 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RAB3GAP2Q9H2M9 1393 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 VGLL3A8MV65 326 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 J3QR89 54 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TCF4P15884 667 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 KCNA2P16389 499 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 CHKAP35790 457 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 TCF7P36402 384 aaPredicted RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 NNMTP40261 264 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RXRGP48443 463 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 SEMA3FQ13275 785 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 KCNB1Q14721 858 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 UBXN11Q5T124 520 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PGM2L1Q6PCE3 622 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 RGS9BPQ6ZS82 235 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PCGF5Q86SE9 256 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 METTL23Q86XA0 190 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 KSR1Q8IVT5 923 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ELMOD1Q8N336 334 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 HDDC3Q8N4P3 179 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 DGCR14Q96DF8 476 aaKnown RBP4.82□□□□□ -1.64
PTPN13-202ENST00000411767 YIPF3Q9GZM5 350 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PRKAG2Q9UGJ0 569 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PCDHB8Q9UN66 801 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ABCG2Q9UNQ0 655 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PCDHB13Q9Y5F0 798 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 PCDHGB7Q9Y5F8 929 aa4.82□□□□□ -1.64
PTPN13-202ENST00000411767 ANKRD30BQ9BXX2 1392 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 LRRIQ4A6NIV6 560 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 DDX39AO00148 427 aaKnown RBP4.81□□□□□ -1.64
PTPN13-202ENST00000411767 STK17BO94768 372 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 MED26O95402 600 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 VNN2O95498 520 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 NFIXQ14938 502 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 MTFR1Q15390 333 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 EZH2Q15910 746 aaKnown RBP4.81□□□□□ -1.64
PTPN13-202ENST00000411767 C1orf146Q5VVC0 180 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 KLHL7Q8IXQ5 586 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 CLYBLQ8N0X4 340 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 RASGEF1AQ8N9B8 481 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 NUDT12Q9BQG2 462 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 KLHL4Q9C0H6 718 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 USP44Q9H0E7 712 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 RWDD2AQ9UIY3 292 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 PEX16Q9Y5Y5 336 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 OR14I1A6ND48 311 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 C9IYK1 514 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 H3BNX3 289 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 SSX4O60224 188 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 SCO1O75880 301 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 SNAPC5O75971 98 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 ALDH1A2O94788 518 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 CSF1RP07333 972 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 CHRNB1P11230 501 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 ZNF12P17014 697 aa4.81□□□□□ -1.64
PTPN13-202ENST00000411767 NPR3P17342 541 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms