RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 MEFVO15553 781 aaPredicted RBP22.24■■□□□ 1.15
VSX1-203ENST00000409285 CXCL8P10145 99 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 ITGA4P13612 1032 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 YARSP54577 528 aaKnown RBP22.24■■□□□ 1.15
VSX1-203ENST00000409285 BFSP1Q12934 665 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 KCNJ12Q14500 433 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 SLC10A6Q3KNW5 377 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 CCDC40Q4G0X9 1142 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 ALKAL1Q6UXT8 129 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 TRIM59Q8IWR1 403 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 RNF214Q8ND24 703 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 SNX27Q96L92 541 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 ASB7Q9H672 318 aa22.24■■□□□ 1.15
VSX1-203ENST00000409285 ACRP10323 421 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 OSTNP61366 133 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 PPP2R3AQ06190 1150 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 AGMOQ6ZNB7 445 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 NT5DC4Q86YG4 428 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 NPAS4Q8IUM7 802 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 RDH13Q8NBN7 331 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 PARD3BQ8TEW8 1205 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 RNF39Q9H2S5 420 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 CNTN3Q9P232 1028 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 MAGEC2Q9UBF1 373 aaPredicted RBP22.23■■□□□ 1.15
VSX1-203ENST00000409285 KIAA1671Q9BY89 1806 aa22.23■■□□□ 1.15
VSX1-203ENST00000409285 LRRC10BA6NIK2 292 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 FGBP02675 491 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 KRT13P13646 458 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 EPHB4P54760 987 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 WDR5P61964 334 aaKnown RBP22.22■■□□□ 1.15
VSX1-203ENST00000409285 TMEM240Q5SV17 173 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 DERAQ9Y315 318 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 MEIS3P2A8K0S8 358 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 KCNE1P15382 129 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 AKAP5P24588 427 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 VAMP7P51809 220 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 ZNF365Q70YC5 407 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 ANKRD20A12PQ8NF67 263 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 HERVK_113Q902F9 699 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 SLC35C1Q96A29 364 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.22■■□□□ 1.15
VSX1-203ENST00000409285 RSAD1Q9HA92 442 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 LIMA1Q9UHB6 759 aaKnown RBP22.22■■□□□ 1.15
VSX1-203ENST00000409285 C2CD2Q9Y426 696 aa22.22■■□□□ 1.15
VSX1-203ENST00000409285 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.22■■□□□ 1.15
VSX1-203ENST00000409285 HOXA2O43364 376 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 AMHP03971 560 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 ATP1A3P13637 1013 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 PRKCSHP14314 528 aaPredicted RBP22.21■■□□□ 1.15
VSX1-203ENST00000409285 WNT7BP56706 349 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.21■■□□□ 1.15
VSX1-203ENST00000409285 APTXQ7Z2E3 356 aaKnown RBP22.21■■□□□ 1.15
VSX1-203ENST00000409285 WDR49Q8IV35 697 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 PLEKHO2Q8TD55 490 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 PCDH10Q9P2E7 1040 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 PCDHB7Q9Y5E2 793 aa22.21■■□□□ 1.15
VSX1-203ENST00000409285 NLRC5Q86WI3 1866 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 LACTBL1A8MY62 500 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 MAGEA10P43363 369 aaPredicted RBP22.2■■□□□ 1.14
VSX1-203ENST00000409285 MAN2A1Q16706 1144 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 HSP90AA4PQ58FG1 418 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 C1orf220Q5T0J3 134 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 RASIP1Q5U651 963 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 OTOP2Q7RTS6 562 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 GSTCDQ8NEC7 633 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 LPPQ93052 612 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 TOP1MTQ969P6 601 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 FNBP1Q96RU3 617 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 CGRRF1Q99675 332 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 TUBGCP2Q9BSJ2 902 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 APOL6Q9BWW8 343 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 PDE11AQ9HCR9 933 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 RNF19AQ9NV58 838 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 PARP2Q9UGN5 583 aa22.2■■□□□ 1.14
VSX1-203ENST00000409285 ARL5CA6NH57 179 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 LRRIQ3A6PVS8 624 aaPredicted RBP22.19■■□□□ 1.14
VSX1-203ENST00000409285 STX10O60499 249 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 GTF2H1P32780 548 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 SCN1AP35498 2009 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 MLH1P40692 756 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 AP3M2P53677 418 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 KRT31Q15323 416 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 UVSSAQ2YD98 709 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 GLB1LQ6UWU2 654 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 CCDC127Q96BQ5 260 aa22.19■■□□□ 1.14
VSX1-203ENST00000409285 MTIF3Q9H2K0 278 aaKnown RBP22.19■■□□□ 1.14
VSX1-203ENST00000409285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.19■■□□□ 1.14
VSX1-203ENST00000409285 PTGESO14684 152 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 PMM2O15305 246 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 OFD1O75665 1012 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 CDK11BP21127 795 aaKnown RBP22.18■■□□□ 1.14
VSX1-203ENST00000409285 MTIF2P46199 727 aaKnown RBP22.18■■□□□ 1.14
VSX1-203ENST00000409285 KCNJ6P48051 423 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 DLG4P78352 724 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 ZBTB6Q15916 424 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 CLLU1OSQ5K130 101 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 EFCAB13Q8IY85 973 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 RNF169Q8NCN4 708 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 ZFP42Q96MM3 310 aa22.18■■□□□ 1.14
VSX1-203ENST00000409285 GAD1Q99259 594 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms