RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 HCFC1R1Q9NWW0 138 aa4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DNMT3BQ9UBC3 853 aaKnown RBP4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SEPT9Q9UHD8 586 aaPredicted RBP4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 EVLQ9UI08 416 aaPredicted RBP4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 GIT1Q9Y2X7 761 aa4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PCDHB9Q9Y5E1 797 aa4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 STK24Q9Y6E0 443 aa4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DSPP15924 2871 aaKnown RBP4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 IGF2RP11717 2491 aa4.32□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SPAG17Q6Q759 2223 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CCDC194A0A1B0GVG4 234 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SPAARA0A1B0GVQ0 90 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 WDR27A2RRH5 827 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 MYBPHLA2RUH7 354 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 UPK3BL1B0FP48 263 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 UPK3BL2E5RIL1 263 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 HIP1O00291 1037 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 B4GALT3O60512 393 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 OPHN1O60890 802 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CSDE1O75534 798 aaKnown RBP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CALM1P0DP23 149 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CALM2P0DP24 149 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CALM3P0DP25 149 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 FCARP24071 287 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 AXLP30530 894 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SFNP31947 248 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SREBF1P36956 1147 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PXNP49023 591 aaPredicted RBP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 JAK3P52333 1124 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 NAPAP54920 295 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PLCB2Q00722 1185 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 KCNC4Q03721 635 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DSC1Q08554 894 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 GRSF1Q12849 480 aaKnown RBP eCLIP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 RAB33AQ14088 237 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PON2Q15165 354 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SEC23AQ15436 765 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 MTERF2Q49AM1 385 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ARHGAP29Q52LW3 1261 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 TRIM61Q5EBN2 209 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 FAM78AQ5JUQ0 283 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 RTP2Q5QGT7 225 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 FAM171A1Q5VUB5 890 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 LARP1BQ659C4 914 aaKnown RBP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PMS2CLQ68D20 193 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 LRRC69Q6ZNQ3 347 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 KRT25Q7Z3Z0 450 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SRGAP1Q7Z6B7 1085 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 RABEPKQ7Z6M1 372 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 RAB44Q7Z6P3 723 aaPredicted RBP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 MFSD6LQ8IWD5 586 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 TMEFF1Q8IYR6 380 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CHCHD4Q8N4Q1 142 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 GAD1Q99259 594 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CORO1BQ9BR76 489 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DSCC1Q9BVC3 393 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ANO3Q9BYT9 981 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 GPR62Q9BZJ7 368 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DCTPP1Q9H773 170 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ASAH2Q9NR71 780 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DIAPH3Q9NSV4 1193 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SUCLA2Q9P2R7 463 aaPredicted RBP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DKK4Q9UBT3 224 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 APOBEC2Q9Y235 224 aaKnown RBP4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 RAXQ9Y2V3 346 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 IPPQ9Y573 584 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 MAST4O15021 2626 aa4.31□□□□□ -1.72
RNU6ATAC-201ENST00000408749 FLNBO75369 2602 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SALL3Q9BXA9 1300 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CCDC69A6NI79 296 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 HEPACAM2A8MVW5 462 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 hCG_1984214I3L0E3 225 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 MEIS1O00470 390 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CDX4O14627 284 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 TRAPPC3O43617 180 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 EXTL3O43909 919 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DKC1O60832 514 aaKnown RBP eCLIP4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 EFEMP2O95967 443 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PRB1P04280 392 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ATP4AP20648 1035 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 OR1D2P34982 312 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 HOXD12P35452 270 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 DHPSP49366 369 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ADCY7P51828 1080 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 PLD1Q13393 1074 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 TUSC3Q13454 348 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CCINQ13939 588 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SLC5A9Q2M3M2 681 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 FBXO43Q4G163 708 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CASC1Q6TDU7 716 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 NFXL1Q6ZNB6 911 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ANKS3Q6ZW76 656 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 LPCAT2Q7L5N7 544 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 SCUBE3Q8IX30 993 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ZNF654Q8IZM8 581 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 ZNF713Q8N859 430 aaPredicted RBP4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 KRI1Q8N9T8 703 aaKnown RBP4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 RDM1Q8NG50 284 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 CEP76Q8TAP6 659 aa4.3□□□□□ -1.72
RNU6ATAC-201ENST00000408749 LNX1Q8TBB1 728 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms