RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 CYP46A1Q9Y6A2 500 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 ACACBO00763 2458 aa13.61□□□□□ -0.23
APOBEC3B-204ENST00000407298 CCL16O15467 120 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 LRRN2O75325 713 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 SLITRK3O94933 977 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 THP07101 528 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 RPS9P46781 194 aaKnown RBP13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 CYP4A11Q02928 519 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 CAPSQ13938 189 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 PPP2R5DQ14738 602 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 RTP2Q5QGT7 225 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZNF852Q6ZMS4 543 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 LNX1Q8TBB1 728 aaPredicted RBP13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 PRIMPOLQ96LW4 560 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 LTB4R2Q9NPC1 389 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 PRMT7Q9NVM4 692 aaPredicted RBP13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 CDV3Q9UKY7 258 aaKnown RBP13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 PCDHA12Q9UN75 941 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 KCNJ14Q9UNX9 436 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 MIA3Q5JRA6 1907 aa13.6□□□□□ -0.23
APOBEC3B-204ENST00000407298 N4BP3O15049 544 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZBTB39O15060 712 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 XRCC6P12956 609 aaKnown RBP eCLIP13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 GLRA2P23416 452 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 NRLP54845 237 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 NTHL1P78549 312 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 RAB33AQ14088 237 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 AXDND1Q5T1B0 1012 aaPredicted RBP13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZBTB8OSQ8IWT0 167 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 ZBTB44Q8NCP5 570 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 ST13P5Q8NFI4 369 aaPredicted RBP13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 ITFG1Q8TB96 612 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 SLC7A14Q8TBB6 771 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 ASAP3Q8TDY4 903 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 RABGGTAQ92696 567 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 CLDN23Q96B33 292 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 EIF2AK1Q9BQI3 630 aaKnown RBP13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 TM6SF1Q9BZW5 370 aa13.59□□□□□ -0.23
APOBEC3B-204ENST00000407298 CASTOR2A6NHX0 329 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 LRRIQ4A6NIV6 560 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 B4GALT5O43286 388 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 ECI2O75521 394 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 SPIRE1Q08AE8 756 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 AIFM3Q96NN9 605 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 HSD17B14Q9BPX1 270 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 ADPGKQ9BRR6 497 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 RTKNQ9BST9 563 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 POLR3FQ9H1D9 316 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 C2orf40Q9H1Z8 148 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 EPC1Q9H2F5 836 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 BRMS1Q9HCU9 246 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 RAB23Q9ULC3 237 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 MRPS23Q9Y3D9 190 aaKnown RBP13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 MTF2Q9Y483 593 aaPredicted RBP13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 SPTBN2O15020 2390 aa13.58□□□□□ -0.24
APOBEC3B-204ENST00000407298 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 MAN2B1O00754 1011 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 TRAPPC3O43617 180 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 LILRB5O75023 590 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 KIF4AO95239 1232 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 OR1D2P34982 312 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 RARRES1P49788 294 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 ATXN1P54253 815 aaKnown RBP13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 ADCY1Q08828 1119 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 STK3Q13188 491 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 TPRG1Q6ZUI0 275 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 NPAS3Q8IXF0 933 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 MCPH1Q8NEM0 835 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 HASPINQ8TF76 798 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 WASF1Q92558 559 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 NELL1Q92832 810 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 IER2Q9BTL4 223 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 AVENQ9NQS1 362 aaPredicted RBP13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 DNMT3BQ9UBC3 853 aaKnown RBP13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
APOBEC3B-204ENST00000407298 DOCK6Q96HP0 2047 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 SEC24BO95487 1268 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 CALCRLQ16602 461 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 MAMSTRQ6ZN01 415 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 APBB1IPQ7Z5R6 666 aaPredicted RBP13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 DNASE1L2Q92874 299 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 ELSPBP1Q96BH3 223 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 CNTNAP3BQ96NU0 1288 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 PAAF1Q9BRP4 392 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 LARP6Q9BRS8 491 aaKnown RBP13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 CNTNAP3Q9BZ76 1288 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 FZD8Q9H461 694 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 SNTG2Q9NY99 539 aa13.56□□□□□ -0.24
APOBEC3B-204ENST00000407298 MTRRQ9UBK8 725 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms