RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 SPECC1Q5M775 1068 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 FAM171A1Q5VUB5 890 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 MPZL3Q6UWV2 235 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 CEP57Q86XR8 500 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 PALB2Q86YC2 1186 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 GLYCTKQ8IVS8 523 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 CEP120Q8N960 986 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 RAD54LQ92698 747 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 ZBTB45Q96K62 511 aaPredicted RBP14.59□□□□□ -0.07
SDF4-203ENST00000403997 ACAP3Q96P50 834 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.59□□□□□ -0.07
SDF4-203ENST00000403997 TOPORSQ9NS56 1045 aaPredicted RBP14.59□□□□□ -0.07
SDF4-203ENST00000403997 BLOC1S4Q9NUP1 217 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 ODF2LQ9ULJ1 636 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 MTMR6Q9Y217 621 aa14.59□□□□□ -0.07
SDF4-203ENST00000403997 SMIM28A0A1B0GU29 152 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 H0YCG3 227 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 B3GAT3O94766 335 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 FAM13AO94988 1023 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 KIF4AO95239 1232 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 KRT18P05783 430 aaKnown RBP14.58□□□□□ -0.08
SDF4-203ENST00000403997 SPATA31D3P0C874 917 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 PROZP22891 400 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 MATR3P43243 847 aaKnown RBP eCLIP14.58□□□□□ -0.08
SDF4-203ENST00000403997 NAB2Q15742 525 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 ELMSAN1Q6PJG2 1045 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 SPATA31D4Q6ZUB0 917 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 GPR149Q86SP6 731 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 GPR65Q8IYL9 337 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 MYCT1Q8N699 235 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 LRRC15Q8TF66 581 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 EDAQ92838 391 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 EPSTI1Q96J88 318 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 PPP1R10Q96QC0 940 aaKnown RBP14.58□□□□□ -0.08
SDF4-203ENST00000403997 REEP2Q9BRK0 252 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 TTPALQ9BTX7 342 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 CCSER1Q9C0I3 900 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 ZHX3Q9H4I2 956 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 MAN1C1Q9NR34 630 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 ANKFY1Q9P2R3 1169 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 DPP7Q9UHL4 492 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 HCN4Q9Y3Q4 1203 aa14.58□□□□□ -0.08
SDF4-203ENST00000403997 STX6O43752 255 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 TOM1L1O75674 476 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 BRD1O95696 1058 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 RPL17P18621 184 aaKnown RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 DDIT3P35638 169 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 CREMQ03060 361 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 ELAVL2Q12926 359 aaKnown RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 RTP2Q5QGT7 225 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 DCLRE1AQ6PJP8 1040 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 PRSS55Q6UWB4 352 aaPredicted RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 ALKAL1Q6UXT8 129 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 USP49Q70CQ1 688 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 HAUS6Q7Z4H7 955 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 SNX21Q969T3 373 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 BICD1Q96G01 975 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 CLIC6Q96NY7 704 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 ZSCAN16Q9H4T2 348 aaPredicted RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 PARVGQ9HBI0 331 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 FNIP2Q9P278 1114 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 CCDC39Q9UFE4 941 aa14.57□□□□□ -0.08
SDF4-203ENST00000403997 FBXO2Q9UK22 296 aaPredicted RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 ARIH1Q9Y4X5 557 aaPredicted RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 SRPRBQ9Y5M8 271 aaKnown RBP14.57□□□□□ -0.08
SDF4-203ENST00000403997 CCDC195A0A1B0GUA6 201 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 C2CD4DB7Z1M9 353 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 ABLIM1O14639 778 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 CLDN3O15551 220 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 CLCNKBP51801 687 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 NCKAP1LP55160 1127 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 ZXDAP98168 799 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 NOLC1Q14978 699 aaKnown RBP eCLIP14.56□□□□□ -0.083e-6■■□□□ 12.8
SDF4-203ENST00000403997 UPP1Q16831 310 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 SEZ6Q53EL9 994 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 XKR4Q5GH76 650 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 ZPBP2Q6X784 338 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 LARP4BQ92615 738 aaKnown RBP14.56□□□□□ -0.08
SDF4-203ENST00000403997 DDX27Q96GQ7 796 aaKnown RBP14.56□□□□□ -0.08
SDF4-203ENST00000403997 UROC1Q96N76 676 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 GOLGA2P5Q9HBQ8 144 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 SLC38A7Q9NVC3 462 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 GTF3C3Q9Y5Q9 886 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 MYH11P35749 1972 aa14.56□□□□□ -0.08
SDF4-203ENST00000403997 TMEM189-UBE2V1I3L0A0 370 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 K7ENM7 598 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 TGM5O43548 720 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 TRAK2O60296 914 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 TBCAO75347 108 aaKnown RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 HSP90AA1P07900 732 aaKnown RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 KCNE1P15382 129 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 IGFBP6P24592 240 aaPredicted RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 TXLNAP40222 546 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 LIG4P49917 911 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 SOX4Q06945 474 aaPredicted RBP14.55□□□□□ -0.08
SDF4-203ENST00000403997 MCL1Q07820 350 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 PSMD5Q16401 504 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 PTPN21Q16825 1174 aa14.55□□□□□ -0.08
SDF4-203ENST00000403997 RRAGBQ5VZM2 374 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms