RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 DPP9Q86TI2 863 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 SLC47A2Q86VL8 602 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 MSL3Q8N5Y2 521 aaKnown RBP13.21□□□□□ -0.29
CLIP4-203ENST00000401617 SPATA4Q8NEY3 305 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 SLC35G2Q8TBE7 412 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 AFG1LQ8WV93 481 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
CLIP4-203ENST00000401617 DDX1Q92499 740 aaKnown RBP13.21□□□□□ -0.29
CLIP4-203ENST00000401617 CALR3Q96L12 384 aaKnown RBP13.21□□□□□ -0.29
CLIP4-203ENST00000401617 RHOXF2Q9BQY4 288 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 OGFRQ9NZT2 677 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 ANKFY1Q9P2R3 1169 aa13.21□□□□□ -0.29
CLIP4-203ENST00000401617 OGTO15294 1046 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 MAGEB2O15479 319 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 RTN2O75298 545 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 KIF4AO95239 1232 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 CYP11B1P15538 503 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 AP3M2P53677 418 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 FMO1Q01740 532 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 IRF5Q13568 498 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 DUSP28Q4G0W2 176 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.3
CLIP4-203ENST00000401617 RHPN2Q8IUC4 686 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 SYCE1Q8N0S2 351 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 ARHGEF26Q96DR7 871 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 FAM84AQ96KN4 292 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 TINF2Q9BSI4 451 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 PI4K2AQ9BTU6 479 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 ABHD16BQ9H3Z7 469 aa13.21□□□□□ -0.3
CLIP4-203ENST00000401617 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.3
CLIP4-203ENST00000401617 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 USP8P40818 1118 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 CLCN3P51790 818 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 CDR2Q01850 454 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 RPS6KA1Q15418 735 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 FAM187BQ17R55 369 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 CFAP221Q4G0U5 840 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 IQSEC1Q6DN90 963 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 NT5DC3Q86UY8 548 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 NPLOC4Q8TAT6 608 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 PSMB7Q99436 277 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 THAP2Q9H0W7 228 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 ARFGAP3Q9NP61 516 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 C1orf112Q9NSG2 853 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 TMCO5BA8MYB1 307 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 FTLP02792 175 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 SMPD1P17405 629 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 VSNL1P62760 191 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 MBTD1Q05BQ5 628 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 C2orf54Q08AI8 447 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 ACVR2BQ13705 512 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 BEND6Q5SZJ8 279 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 MORN1Q5T089 497 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 SMYD5Q6GMV2 418 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 RHOT2Q8IXI1 618 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 OR5B17Q8NGF7 314 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 HES6Q96HZ4 224 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 PBKQ96KB5 322 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
CLIP4-203ENST00000401617 CNTN6Q9UQ52 1028 aa13.2□□□□□ -0.3
CLIP4-203ENST00000401617 MTA2O94776 668 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 SEC31AO94979 1220 aaKnown RBP13.19□□□□□ -0.3
CLIP4-203ENST00000401617 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 GJB1P08034 283 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 MMEP08473 750 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 ACO1P21399 889 aaKnown RBP13.19□□□□□ -0.3
CLIP4-203ENST00000401617 TNFSF9P41273 254 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 PIK3CAP42336 1068 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 CCDC181Q5TID7 509 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 WDR49Q8IV35 697 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 RUBCNQ92622 972 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 MINDY3Q9H8M7 445 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 IFT122Q9HBG6 1241 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 APOBEC3GQ9HC16 384 aaKnown RBP13.19□□□□□ -0.3
CLIP4-203ENST00000401617 ACP6Q9NPH0 428 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 TNFSF13BQ9Y275 285 aa13.19□□□□□ -0.3
CLIP4-203ENST00000401617 BUB1BO60566 1050 aaPredicted RBP13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ABCB4P21439 1286 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 PDE6CP51160 858 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 SURF1Q15526 300 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 LONRF2Q1L5Z9 754 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 RASAL3Q86YV0 1011 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 METTL13Q8N6R0 699 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ELMO3Q96BJ8 720 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 MS4A14Q96JA4 679 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 FUT8Q9BYC5 575 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 SEPT11Q9NVA2 429 aaKnown RBP13.18□□□□□ -0.3
CLIP4-203ENST00000401617 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
CLIP4-203ENST00000401617 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms