RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SLC37A4O43826 429 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 RGS7P49802 495 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 RBP5P82980 135 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 PID1Q7Z2X4 250 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 SAMD7Q7Z3H4 446 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 ATG4CQ96DT6 458 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 MYCBPQ99417 103 aaPredicted RBP19.24■□□□□ 0.67
COL18A1-204ENST00000400337 ZFP69BQ9UJL9 534 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 ANGPTL2Q9UKU9 493 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 PITPNM2Q9BZ72 1349 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 CPB1P15086 417 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 ZFXP17010 805 aaPredicted RBP19.24■□□□□ 0.67
COL18A1-204ENST00000400337 NPEPPSP55786 919 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 NOP14P78316 857 aaKnown RBP19.24■□□□□ 0.67
COL18A1-204ENST00000400337 R3HDM1Q15032 1099 aaKnown RBP19.24■□□□□ 0.67
COL18A1-204ENST00000400337 NAB2Q15742 525 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 GANCQ8TET4 914 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 MAGEB5Q9BZ81 275 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 ORC6Q9Y5N6 252 aa19.24■□□□□ 0.67
COL18A1-204ENST00000400337 SPAG7O75391 227 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 NFKBIAP25963 317 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 SP110Q9HB58 689 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 F8W8V4 182 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 SGSM1Q2NKQ1 1148 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 TRIM51Q9BSJ1 452 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 RARBP10826 455 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 HSPA8P11142 646 aaKnown RBP19.23■□□□□ 0.67
COL18A1-204ENST00000400337 DPEP1P16444 411 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 MDM2Q00987 491 aaPredicted RBP19.23■□□□□ 0.67
COL18A1-204ENST00000400337 HSP90AA5PQ58FG0 334 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 TMEM117Q9H0C3 514 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 EIF3DO15371 548 aaKnown RBP eCLIP19.23■□□□□ 0.672e-6■■■□□ 15.4
COL18A1-204ENST00000400337 APOEP02649 317 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 TMEM132DQ14C87 1099 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 SUN2Q9UH99 717 aa19.23■□□□□ 0.67
COL18A1-204ENST00000400337 SNX2O60749 519 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SKIP12755 728 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 PDGFRAP16234 1089 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 HIF1AQ16665 826 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 NLRP14Q86W24 1093 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 TTC8Q8TAM2 541 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SENP7Q9BQF6 1050 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 CDK17Q00537 523 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 CACNB2Q08289 660 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 PTPAQ15257 358 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 RASSF3Q86WH2 238 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 ANKMY2Q8IV38 441 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 FBXO28Q9NVF7 368 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SMARCAL1Q9NZC9 954 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 FRMPD1Q5SYB0 1578 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 ASAP2O43150 1006 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 HOXD10P28358 340 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 TMEM62Q0P6H9 643 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 DAGLBQ8NCG7 672 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 UPF3AQ9H1J1 476 aaKnown RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SPON1Q9HCB6 807 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 POLLQ9UGP5 575 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 RPS6P62753 249 aaKnown RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 GRAMD1BQ3KR37 738 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SYCP2LQ5T4T6 812 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 RCOR2Q8IZ40 523 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 TAAR1Q96RJ0 339 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 TRIM4Q9C037 500 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SARS2Q9NP81 518 aaKnown RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 OLA1Q9NTK5 396 aaKnown RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 GH1P01241 217 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 SNAPC2Q13487 334 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 TAF1CQ15572 869 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 ACAD11Q709F0 780 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 OR6P1Q8NGX9 317 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 MCEEQ96PE7 176 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 HACD3Q9P035 362 aa19.22■□□□□ 0.67
COL18A1-204ENST00000400337 FAF1Q9UNN5 650 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-204ENST00000400337 H0Y3Z8 333 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 DFFAO00273 331 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 MSH4O15457 936 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 MGEA5O60502 916 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 HLA-DRAP01903 254 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 CTSHP09668 335 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 ELMSAN1Q6PJG2 1045 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 LRRC71Q8N4P6 559 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 RAPGEF5Q92565 580 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 KCNB2Q92953 911 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 NRXN1Q9ULB1 1477 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 RFC5P40937 340 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 FSCBQ5H9T9 825 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 KRT80Q6KB66 452 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 NUDCD3Q8IVD9 361 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 APPL2Q8NEU8 664 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 LRRC37BQ96QE4 947 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 PRAMEP78395 509 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 ELMOD1Q8N336 334 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 MAFGO15525 162 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 KCNN4O15554 427 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 TYK2P29597 1187 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 NFIAQ12857 509 aa19.21■□□□□ 0.67
COL18A1-204ENST00000400337 A0A1W2PQJ5 194 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 ATP9BO43861 1147 aa19.2■□□□□ 0.66
COL18A1-204ENST00000400337 HAUS5O94927 633 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms