RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 DQX1Q8TE96 717 aaKnown RBP17.64■□□□□ 0.41
NPRL3-201ENST00000399953 PRICKLE1Q96MT3 831 aaPredicted RBP17.64■□□□□ 0.41
NPRL3-201ENST00000399953 NPHS2Q9NP85 383 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 PTPN22Q9Y2R2 807 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 MINDY4BA8MYZ0 360 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 THAP12O43422 761 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 GGPS1O95749 300 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 UQCRFS1P1P0C7P4 283 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 PGM1P36871 562 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 CTTNQ14247 550 aaKnown RBP17.64■□□□□ 0.41
NPRL3-201ENST00000399953 MAP7D1Q3KQU3 841 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
NPRL3-201ENST00000399953 KLHDC10Q6PID8 442 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 TMEM110Q86TL2 294 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 RASSF3Q86WH2 238 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 UBA5Q9GZZ9 404 aa17.64■□□□□ 0.41
NPRL3-201ENST00000399953 TDRKHQ9Y2W6 561 aaKnown RBP17.64■□□□□ 0.41
NPRL3-201ENST00000399953 CETN2P41208 172 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 HSP90AA5PQ58FG0 334 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 TMEM63BQ5T3F8 832 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 AADACL2Q6P093 401 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 PDSS2Q86YH6 399 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 THEMISQ8N1K5 641 aaPredicted RBP17.63■□□□□ 0.41
NPRL3-201ENST00000399953 GLIS3Q8NEA6 775 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 DENND1AQ8TEH3 1009 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 FAM161BQ96MY7 647 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 WHRNQ9P202 907 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 TRAF3IP3Q9Y228 551 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 ZMYM2Q9UBW7 1377 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 CCDC160A6NGH7 325 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 NDC80O14777 642 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 PLSCR1O15162 318 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 SPAG7O75391 227 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 BAG2O95816 211 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 TMEM253P0C7T8 217 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 UQCRBP14927 111 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 COILP38432 576 aaPredicted RBP17.63■□□□□ 0.41
NPRL3-201ENST00000399953 C6orf163Q5TEZ5 329 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 CCDC85AQ96PX6 553 aaPredicted RBP17.63■□□□□ 0.41
NPRL3-201ENST00000399953 CCDC77Q9BR77 488 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 SH3GLB2Q9NR46 395 aa17.63■□□□□ 0.41
NPRL3-201ENST00000399953 KANSL1LA0AUZ9 987 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 PGM3O95394 542 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 PHKA1P46020 1223 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 RPL5P46777 297 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 GEMIN4P57678 1058 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 KCNH2Q12809 1159 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 CCDC62Q6P9F0 684 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 RFX8Q6ZV50 586 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 NET1Q7Z628 596 aaPredicted RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TREML1Q86YW5 311 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ERMNQ8TAM6 284 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 HSPBAP1Q96EW2 488 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TTC1Q99614 292 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TRPV5Q9NQA5 729 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TUBA8Q9NY65 449 aaPredicted RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 STK17AQ9UEE5 414 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 NUP188Q5SRE5 1749 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 DLEC1Q9Y238 1755 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 M0R2N6 131 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 PRPF4O43172 522 aaKnown RBP eCLIP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ESRRAP11474 423 aaPredicted RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 SLC9A1P19634 815 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 CHKAP35790 457 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ARFIP2P53365 341 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 SLC18A1P54219 525 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 IFIT5Q13325 482 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TMED2Q15363 201 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 BLOC1S4Q9NUP1 217 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 PCDHA6Q9UN73 950 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 PCDHA8Q9Y5H6 950 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 RREB1Q92766 1687 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 SCN11AQ9UI33 1791 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 SPDYE16A6NNV3 312 aaPredicted RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 P4HA2O15460 535 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 BUD23O43709 281 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 MAGEC1O60732 1142 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ALDH2P05091 517 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 CHN2P52757 468 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TBL3Q12788 808 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 NR1H3Q13133 447 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 CYP1B1Q16678 543 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 TRMT5Q32P41 509 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 PDCD4Q53EL6 469 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 DPY19L2P1Q6NXN4 242 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 C3orf62Q6ZUJ4 267 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 LRRC6Q86X45 466 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ZDHHC14Q8IZN3 488 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 SYT2Q8N9I0 419 aaPredicted RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 DEPTORQ8TB45 409 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 LARP4BQ92615 738 aaKnown RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 CYTH2Q99418 400 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ANKRD2Q9GZV1 360 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 ARPP21Q9UBL0 812 aaPredicted RBP17.62■□□□□ 0.41
NPRL3-201ENST00000399953 GRID1Q9ULK0 1009 aa17.62■□□□□ 0.41
NPRL3-201ENST00000399953 E9PBE3 544 aa17.61■□□□□ 0.41
NPRL3-201ENST00000399953 AP1G1O43747 822 aa17.61■□□□□ 0.41
NPRL3-201ENST00000399953 PLEKHG4Q58EX7 1191 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms