RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 NR1I3Q14994 352 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 TTC30AQ86WT1 665 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 KLF6Q99612 283 aaPredicted RBP13.92□□□□□ -0.18
ITSN1-208ENST00000399349 HPCAL4Q9UM19 191 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 PFASO15067 1338 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 ABCA8O94911 1581 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 E2F8A0AVK6 867 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
ITSN1-208ENST00000399349 FMO5P49326 533 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 P3H1Q32P28 736 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 PGBD4Q96DM1 585 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 MMP19Q99542 508 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 SP110Q9HB58 689 aa13.92□□□□□ -0.18
ITSN1-208ENST00000399349 KIF1CO43896 1103 aaKnown RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 RTN2O75298 545 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 DHX34Q14147 1143 aaKnown RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 TMED8Q6PL24 325 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 DDIASQ8IXT1 998 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 NOA1Q8NC60 698 aaKnown RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 ATL2Q8NHH9 583 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 DTX3LQ8TDB6 740 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 RBM15Q96T37 977 aaKnown RBP eCLIP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 TRABDQ9H4I3 376 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 L2HGDHQ9H9P8 463 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 PRKCBP05771 671 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 RMDN1Q96DB5 314 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 C18orf8Q96DM3 657 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 CENPKQ9BS16 269 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 OSBPL1AQ9BXW6 950 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 CELF4Q9BZC1 486 aaKnown RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 ATP5HO75947 161 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 RHOBTB3O94955 611 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 GYPCP04921 128 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 LRRC36Q1X8D7 754 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 C2orf69Q8N8R5 385 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 GCOM2Q9BZD3 368 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 CTDNEP1O95476 244 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 GGPS1O95749 300 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 PDGFRAP16234 1089 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 COPB2P35606 906 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 TMEM62Q0P6H9 643 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 ENOSF1Q7L5Y1 443 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 RASGRP2Q7LDG7 609 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 ASIC4Q96FT7 647 aa13.91□□□□□ -0.18
ITSN1-208ENST00000399349 PRDM5Q9NQX1 630 aaPredicted RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 HERC5Q9UII4 1024 aaKnown RBP13.91□□□□□ -0.18
ITSN1-208ENST00000399349 LRRC7Q96NW7 1537 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 SYCE1LA8MT33 242 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 PDGFRBP09619 1106 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 SOX11P35716 441 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 ALDH18A1P54886 795 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 TAS2R42Q7RTR8 314 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 USP33Q8TEY7 942 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CYFIP2Q96F07 1278 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CEP19Q96LK0 163 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 MMTAG2Q9BU76 263 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 RAB6BQ9NRW1 208 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 NDFIP2Q9NV92 336 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 DONSONQ9NYP3 566 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 EHD2Q9NZN4 543 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CPB1P15086 417 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CUL3Q13618 768 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 EFTUD2Q15029 972 aaKnown RBP eCLIP13.9□□□□□ -0.182e-8■■■■■ 57.6
ITSN1-208ENST00000399349 SNRNP35Q16560 246 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 PPP4R4Q6NUP7 873 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 TRIM72Q6ZMU5 477 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CDKL3Q8IVW4 592 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 STK33Q9BYT3 514 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 GEMIN8Q9NWZ8 242 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 DDX56Q9NY93 547 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 AIPL1Q9NZN9 384 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 LMNAP02545 664 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 MYBL1P10243 752 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 MCF2P10911 925 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CARSP49589 748 aaKnown RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CORO7P57737 925 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 SP8Q8IXZ3 490 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 ACAP3Q96P50 834 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 MCEEQ96PE7 176 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 TRIM33Q9UPN9 1127 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 DNAJC6O75061 913 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 CHN1P15882 459 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-208ENST00000399349 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 NDUFAF2Q8N183 169 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 PI4K2AQ9BTU6 479 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 NDE1Q9NXR1 346 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 PSD3Q9NYI0 1048 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 TUBE1Q9UJT0 475 aa13.9□□□□□ -0.18
ITSN1-208ENST00000399349 TSPOAP1O95153 1857 aa13.9□□□□□ -0.19
ITSN1-208ENST00000399349 HSPA9P38646 679 aaKnown RBP13.89□□□□□ -0.19
ITSN1-208ENST00000399349 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
ITSN1-208ENST00000399349 PARP9Q8IXQ6 854 aa13.89□□□□□ -0.19
ITSN1-208ENST00000399349 MAGEB5Q9BZ81 275 aa13.89□□□□□ -0.19
ITSN1-208ENST00000399349 TARSL2A2RTX5 802 aaKnown RBP13.89□□□□□ -0.19
ITSN1-208ENST00000399349 APOL1O14791 398 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms