RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 NPTXRO95502 500 aa11.88□□□□□ -0.51
RGPD2-201ENST00000398146 HIST2H2ACQ16777 129 aaPredicted RBP11.88□□□□□ -0.51
RGPD2-201ENST00000398146 HIST2H2AA3Q6FI13 130 aa11.88□□□□□ -0.51
RGPD2-201ENST00000398146 EAF2Q96CJ1 260 aaPredicted RBP11.88□□□□□ -0.51
RGPD2-201ENST00000398146 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
RGPD2-201ENST00000398146 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
RGPD2-201ENST00000398146 PLA2G4CQ9UP65 541 aa11.88□□□□□ -0.51
RGPD2-201ENST00000398146 EDC4Q6P2E9 1401 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CFAP99D6REC4 459 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 ZBTB5O15062 677 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 KRT33AO76009 404 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 TCP1P17987 556 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 MAN2A1Q16706 1144 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 SPATA1Q5VX52 437 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RCSD1Q6JBY9 416 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 SFR1Q86XK3 245 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 DDI1Q8WTU0 396 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 BTBD6Q96KE9 485 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 LRRC14BA6NHZ5 514 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 TEX28O15482 410 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 GTF2A2P52657 109 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RWDD2BP57060 319 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RPS7P62081 194 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 BFSP2Q13515 415 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 EZH2Q15910 746 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RNASE11Q8TAA1 199 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CLMNQ96JQ2 1002 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CAPS2Q9BXY5 557 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 EPN1Q9Y6I3 576 aaPredicted RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CARMIL3Q8ND23 1372 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 POTEMA6NI47 508 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 APOL1O14791 398 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CALB1P05937 261 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 ARL4CP56559 192 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 DR1Q01658 176 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 ABCG4Q9H172 646 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RERGLQ9H628 205 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CYP26B1Q9NR63 512 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 ATP6V1HQ9UI12 483 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RNF103-CHMP3A0A140T963 221 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 hCG_1984214I3L0E3 225 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 PFDN1O60925 122 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 KRT14P02533 472 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CHRM3P20309 590 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 C6orf10Q5SRN2 563 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 FAM47EQ6ZV65 393 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 BTN2A1Q7KYR7 527 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 ZNF713Q8N859 430 aaPredicted RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 POMGNT2Q8NAT1 580 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 SLC44A5Q8NCS7 719 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 KIAA1468Q9P260 1216 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 APOBEC2Q9Y235 224 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 FHOD1Q9Y613 1164 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 QARSP47897 775 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 BCAR1P56945 870 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 CAMK2GQ13555 558 aaPredicted RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 DDX39BQ13838 428 aaKnown RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 POLD3Q15054 466 aaPredicted RBP11.87□□□□□ -0.51
RGPD2-201ENST00000398146 LXNQ9BS40 222 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 RNF208Q9H0X6 261 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 NCKAP1Q9Y2A7 1128 aa11.87□□□□□ -0.51
RGPD2-201ENST00000398146 TBKBP1A7MCY6 615 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 SEC24DO94855 1032 aaPredicted RBP11.86□□□□□ -0.51
RGPD2-201ENST00000398146 CTSEP14091 401 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 PEX19P40855 299 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 CDH6P55285 790 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 TFDP2Q14188 446 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 COG2Q14746 738 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 PDIA6Q15084 440 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 HLA-DQA1Q5Y7H0 255 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 DIS3LQ8TF46 1054 aaKnown RBP11.86□□□□□ -0.51
RGPD2-201ENST00000398146 CD209Q9NNX6 404 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 AGO2Q9UKV8 859 aaKnown RBP11.86□□□□□ -0.51
RGPD2-201ENST00000398146 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 PGRMC1O00264 195 aaKnown RBP11.86□□□□□ -0.51
RGPD2-201ENST00000398146 RASSF9O75901 435 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 KRT37O76014 449 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 LTKP29376 864 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 NCKAP1LP55160 1127 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 FKBP3Q00688 224 aaKnown RBP11.86□□□□□ -0.51
RGPD2-201ENST00000398146 KYNUQ16719 465 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 KCNV1Q6PIU1 500 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 ZNF280CQ8ND82 737 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 SENP6Q9GZR1 1112 aaPredicted RBP11.86□□□□□ -0.51
RGPD2-201ENST00000398146 ZNF556Q9HAH1 456 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 SPTLC3Q9NUV7 552 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 A6NNZ2 444 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 GRAP2O75791 330 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 PLEKHA8P1O95397 391 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 GPC1P35052 558 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 RBL2Q08999 1139 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 RGS9BPQ6ZS82 235 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 LRRC71Q8N4P6 559 aa11.86□□□□□ -0.51
RGPD2-201ENST00000398146 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms