RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 LRRC23Q53EV4 343 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 CCDC25Q86WR0 208 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 ARHGEF19Q8IW93 802 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 RHOT2Q8IXI1 618 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 ZSWIM1Q9BR11 485 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 PCIF1Q9H4Z3 704 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 PIDD1Q9HB75 910 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 DMAC2Q9NW81 257 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 WRAP73Q9P2S5 460 aaPredicted RBP17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 FAM198AQ9UFP1 575 aa17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
CHMP1A-201ENST00000397901 TISP43B9A030 160 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 SUN1O94901 812 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 COMTP21964 271 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 LMNB2Q03252 620 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 DYNC1I2Q13409 638 aaKnown RBP17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 NFIL3Q16649 462 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 RAB3IPQ96QF0 476 aaPredicted RBP17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 IDI2Q9BXS1 227 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 MTRF1LQ9UGC7 380 aaKnown RBP17.08■□□□□ 0.33
CHMP1A-201ENST00000397901 SMCHD1A6NHR9 2005 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 CFBP00751 764 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 KCNJ1P48048 391 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 DRG2P55039 364 aaKnown RBP17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 EMSYQ7Z589 1322 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 LMO3Q8TAP4 145 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 BTBD6Q96KE9 485 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 SYT15Q9BQS2 421 aa17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHMP1A-201ENST00000397901 PYGMP11217 842 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 TUBP50607 506 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 C6orf118Q5T5N4 469 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 SEL1L2Q5TEA6 688 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 SH3BP5LQ7L8J4 393 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 CCDC105Q8IYK2 499 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 KAT5Q92993 513 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 CTNNAL1Q9UBT7 734 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 MIF4GDA9UHW6 222 aaKnown RBP17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 PDLIM1O00151 329 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 O00370 1275 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 AGTP01019 485 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 BCRP11274 1271 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 BMP3P12645 472 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 CTNNA2P26232 953 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 GPC5P78333 572 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 KLC1Q07866 573 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 C11orf63Q6NUN7 778 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 STXBP4Q6ZWJ1 553 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 MGARPQ8TDB4 240 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 TRIM7Q9C029 511 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 ACP6Q9NPH0 428 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 GGT7Q9UJ14 662 aa17.07■□□□□ 0.32
CHMP1A-201ENST00000397901 MAP3K13O43283 966 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 RIPK2O43353 540 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 GAS7O60861 476 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PSMD10O75832 226 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 CYP3A4P08684 503 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PYGBP11216 843 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 IMPDH2P12268 514 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 CALB2P22676 271 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 CHRNA5P30532 468 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 SKIV2L2P42285 1042 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 GCLMP48507 274 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 CLUL1Q15846 466 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 TMEM154Q6P9G4 183 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 OTUD6AQ7L8S5 288 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 VCXQ9H320 206 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 RNPEPL1Q9HAU8 725 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PI4KBQ9UBF8 816 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PCYOX1Q9UHG3 505 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 CD2APQ9Y5K6 639 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PODXLO00592 558 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 RASGRF2O14827 1237 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 NPM3O75607 178 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PDHA1P08559 390 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 JAG1P78504 1218 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 LRRC14Q15048 493 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 ABCB5Q2M3G0 1257 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 CROCCP2Q86T23 111 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 ATL2Q8NHH9 583 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PCDHB18PQ96TA0 734 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 POP1Q99575 1024 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 RXFP1Q9HBX9 757 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 SERPINA10Q9UK55 444 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 PCDHA3Q9Y5H8 950 aa17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 GOLGB1Q14789 3259 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-201ENST00000397901 SETSIPP0DME0 302 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 MYBL1P10243 752 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 ACADSP16219 412 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 HSPA6P17066 643 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 SP100P23497 879 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 PEX5P50542 639 aa17.05■□□□□ 0.32
CHMP1A-201ENST00000397901 PRELPP51888 382 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms