RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 GRK7Q8WTQ7 553 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 SYT17Q9BSW7 474 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 LZTFL1Q9NQ48 299 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 RCOR3Q9P2K3 495 aaPredicted RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 AGO2Q9UKV8 859 aaKnown RBP6.3□□□□□ -1.4
PTPRD-206ENST00000397617 CLDN3O15551 220 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 IGHA2P01877 340 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 MYBP10242 640 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 SLC9A7Q96T83 725 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 ACTL7BQ9Y614 415 aa6.3□□□□□ -1.4
PTPRD-206ENST00000397617 NRCAMQ92823 1304 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 PLXNA1Q9UIW2 1896 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 PARNO95453 639 aaKnown RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 NUDT17P0C025 328 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 SKIP12755 728 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 PCK1P35558 622 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 LIG4P49917 911 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 PDE6CP51160 858 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 TBC1D10BQ4KMP7 808 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 MUM1L1Q5H9M0 696 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 ISM2Q6H9L7 571 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CCNI2Q6ZMN8 369 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CCDC89Q8N998 374 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 TAAR1Q96RJ0 339 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 TNFAIP3P21580 790 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 SLC30A10Q6XR72 485 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 EXD1Q8NHP7 514 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 PRM3Q9NNZ6 103 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 DDX3XO00571 662 aaKnown RBP eCLIP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CABYRO75952 493 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CASP1P29466 404 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 HTR7P34969 479 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CLCN6P51797 869 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF132P52740 706 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 PLEKHA7Q6IQ23 1121 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 SAMD7Q7Z3H4 446 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 GPR65Q8IYL9 337 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 IL31RAQ8NI17 732 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 HELQQ8TDG4 1101 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 POMGNT1Q8WZA1 660 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 AGPAT1Q99943 283 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 MTRF1LQ9UGC7 380 aaKnown RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CYP1A2P05177 515 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 KRT7P08729 469 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 ERVK-9P63128 1117 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 GLYCTKQ8IVS8 523 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CCDC60Q8IWA6 550 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 INTS2Q9H0H0 1204 aaKnown RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 LRRC19Q9H756 370 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 MAPK8IP1Q9UQF2 711 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CCDC169A6NNP5 214 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 F2P00734 622 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 GLI1P08151 1106 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 NSFP46459 744 aaKnown RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 FNIP2Q9P278 1114 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 SMIM35A0A1B0GVV1 85 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 USP27XA6NNY8 438 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 MYO1FO00160 1098 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 NOP56O00567 594 aaKnown RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 CASP5P51878 434 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 AIF1P55008 147 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 GRB14Q14449 540 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 XKR4Q5GH76 650 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 NT5DC3Q86UY8 548 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 RIBC1Q8N443 379 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 NKD2Q969F2 451 aaPredicted RBP6.29□□□□□ -1.4
PTPRD-206ENST00000397617 ZSWIM8A7E2V4 1837 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 MYO9BQ13459 2157 aa6.29□□□□□ -1.4
PTPRD-206ENST00000397617 RALGAPA2Q2PPJ7 1873 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ATXN2Q99700 1313 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF541Q9H0D2 1346 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ADAMTS3O15072 1205 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 SPAG6O75602 509 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 KLRC1P26715 233 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 KIAA1755Q5JYT7 1200 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 OLFML2BQ68BL8 750 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PGM2Q96G03 612 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 DESI2Q9BSY9 194 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 TMEM117Q9H0C3 514 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CHST12Q9NRB3 414 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ITGA11Q9UKX5 1188 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CDK16Q00536 496 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 ZNF33AQ06730 810 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 AENQ8WTP8 325 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 NAT9Q9BTE0 207 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CST5P28325 142 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 GALCP54803 685 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CTTNQ14247 550 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 SLC10A4Q96EP9 437 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CNOT10Q9H9A5 744 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 RAVER2Q9HCJ3 691 aaKnown RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PTPRHQ9HD43 1115 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 HMGB1P1B2RPK0 211 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 RNF225M0QZC1 329 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 RAD21O60216 631 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CYP1A1P04798 512 aaPredicted RBP6.28□□□□□ -1.4
PTPRD-206ENST00000397617 CTNNA2P26232 953 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 SESTD1Q86VW0 696 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 GPR20Q99678 358 aa6.28□□□□□ -1.4
PTPRD-206ENST00000397617 PARD6BQ9BYG5 372 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms