RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ECE1P42892 770 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
TRIM40-207ENST00000396581 CLNS1AP54105 237 aaKnown RBP14.26□□□□□ -0.13
TRIM40-207ENST00000396581 MKRN3Q13064 507 aaKnown RBP14.26□□□□□ -0.13
TRIM40-207ENST00000396581 MESDQ14696 234 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 ODR4Q5SWX8 454 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 C1orf220Q5T0J3 134 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 B3GNT9Q6UX72 402 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 PNMA8AQ86V59 439 aaPredicted RBP14.26□□□□□ -0.13
TRIM40-207ENST00000396581 FAM71AQ8IYT1 594 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 GPC2Q8N158 579 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 UHMK1Q8TAS1 419 aaKnown RBP14.26□□□□□ -0.13
TRIM40-207ENST00000396581 NSMCE1Q8WV22 266 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 TBC1D31Q96DN5 1066 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 NACC1Q96RE7 527 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 ECT2Q9H8V3 914 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 RXFP1Q9HBX9 757 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 FGFR1OP2Q9NVK5 253 aa14.26□□□□□ -0.13
TRIM40-207ENST00000396581 TCP11X1B4DZS4 312 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 ZBTB39O15060 712 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 ANP32DO95626 131 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 MAPTP10636 758 aaKnown RBP14.25□□□□□ -0.13
TRIM40-207ENST00000396581 ITIH2P19823 946 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 CCND1P24385 295 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 IVDP26440 423 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 RWDD2BP57060 319 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 DLG4P78352 724 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 PPP3CAQ08209 521 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 CALCOCO2Q13137 446 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 ACVR2BQ13705 512 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 LONRF1Q17RB8 773 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 CCDC38Q502W7 563 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 SYDE1Q6ZW31 735 aaPredicted RBP14.25□□□□□ -0.13
TRIM40-207ENST00000396581 ACER1Q8TDN7 264 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 FAXDC2Q96IV6 333 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 DEFB129Q9H1M3 183 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 WRAP73Q9P2S5 460 aaPredicted RBP14.25□□□□□ -0.13
TRIM40-207ENST00000396581 UVRAGQ9P2Y5 699 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 LGALS13Q9UHV8 139 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 HACL1Q9UJ83 578 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 GTF3C4Q9UKN8 822 aa14.25□□□□□ -0.13
TRIM40-207ENST00000396581 TTC4O95801 387 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 CCNB1P14635 433 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 GBP2P32456 591 aaPredicted RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 ZNF76P36508 570 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 KCNJ1P48048 391 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 VAMP7P51809 220 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 CCNG1P51959 295 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 CCDC15Q0P6D6 951 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 CETN1Q12798 172 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 USH1GQ495M9 461 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 LRCH2Q5VUJ6 765 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 RNF43Q68DV7 783 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 RNF207Q6ZRF8 634 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 SPATA21Q7Z572 469 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 DAW1Q8N136 415 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 ZNF564Q8TBZ8 553 aaPredicted RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 DDX23Q9BUQ8 820 aaKnown RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 GPRC5DQ9NZD1 345 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 NOP53Q9NZM5 478 aaKnown RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 SCAF8Q9UPN6 1271 aaKnown RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 ASTN2O75129 1339 aaPredicted RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 TMEM110-MUSTN1A8MSY1 372 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 IGF2BP3O00425 579 aaKnown RBP eCLIP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 CREB1P16220 341 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 HOXA13P31271 388 aaPredicted RBP14.24□□□□□ -0.13
TRIM40-207ENST00000396581 SNAP25P60880 206 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 MYO1EQ12965 1108 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 ALCAMQ13740 583 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 PTK6Q13882 451 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 BANK1Q8NDB2 785 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 SYT17Q9BSW7 474 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 NUP85Q9BW27 656 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 PTPN22Q9Y2R2 807 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 L3MBTL1Q9Y468 752 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 ACTL7BQ9Y614 415 aa14.24□□□□□ -0.13
TRIM40-207ENST00000396581 SGPL1O95470 568 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 FMO1Q01740 532 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 CAV1Q03135 178 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 LMNB2Q03252 620 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 MPP2Q14168 576 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 LRRC14Q15048 493 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 CGB2Q6NT52 195 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 RELL1Q8IUW5 271 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 DYDC1Q8WWB3 177 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 IFT74Q96LB3 600 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 CCDC113Q9H0I3 377 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 GINM1Q9NU53 330 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 ADGRA3Q8IWK6 1321 aa14.23□□□□□ -0.13
TRIM40-207ENST00000396581 WFS1O76024 890 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 KRT16P08779 473 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 RPSAP08865 295 aaKnown RBP14.22□□□□□ -0.13
TRIM40-207ENST00000396581 MAN1A1P33908 653 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 KRT17Q04695 432 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 NUGGCQ68CJ6 796 aa14.22□□□□□ -0.13
TRIM40-207ENST00000396581 ZNF746Q6NUN9 644 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms