RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ESRRGP62508 458 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 IL9RQ01113 521 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 TRIP10Q15642 601 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 WDR78Q5VTH9 848 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 TAB3Q8N5C8 712 aaPredicted RBP8.95□□□□□ -0.98
NDE1-202ENST00000396355 ZNF579Q8NAF0 562 aaKnown RBP8.95□□□□□ -0.98
NDE1-202ENST00000396355 WASF1Q92558 559 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 ZFYVE19Q96K21 471 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 RNF26Q9BY78 433 aaPredicted RBP8.95□□□□□ -0.98
NDE1-202ENST00000396355 CYP4F11Q9HBI6 524 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 PRM3Q9NNZ6 103 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 ORC4O43929 436 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 GAS8O95995 478 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 PGM1P36871 562 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 MAPK10P53779 464 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 KDSRQ06136 332 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 TMED2Q15363 201 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 SUN5Q8TC36 379 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 LZICQ8WZA0 190 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 CCT6BQ92526 530 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 ATP2A3Q93084 1043 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 RNPEPQ9H4A4 650 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 TMBIM4Q9HC24 238 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 GBA2Q9HCG7 927 aaPredicted RBP8.95□□□□□ -0.98
NDE1-202ENST00000396355 NMRK1Q9NWW6 199 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 NKX1-2Q9UD57 310 aaPredicted RBP8.95□□□□□ -0.98
NDE1-202ENST00000396355 AGAP1Q9UPQ3 857 aa8.95□□□□□ -0.98
NDE1-202ENST00000396355 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 DCDC2CA8MYV0 355 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 POTECB2RU33 542 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 ADCY6O43306 1168 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 UFL1O94874 794 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 SEMA3DO95025 777 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 KRT7P08729 469 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 HSPA8P11142 646 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 ATP5DP30049 168 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 GSTA5Q7RTV2 222 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 SYMPKQ92797 1274 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 SLC39A3Q9BRY0 314 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 CELF4Q9BZC1 486 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 Q9H521 79 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 DCLRE1BQ9H816 532 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 MAGEB6P1A0A0J9YX57 407 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 MAN1A2O60476 641 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 KRT36O76013 467 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 CLPTM1O96005 669 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 GHRP10912 638 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 EEF1DP29692 281 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 ARPP19P56211 112 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 NCALDP61601 193 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 TRIP13Q15645 432 aaPredicted RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 SH3RF1Q7Z6J0 888 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 SYT2Q8N9I0 419 aaPredicted RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 CFAP57Q96MR6 1250 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 ZSCAN10Q96SZ4 725 aaPredicted RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.94□□□□□ -0.982e-6■■■□□ 14.7
NDE1-202ENST00000396355 CEP72Q9P209 647 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 CNTNAP5Q8WYK1 1306 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 NOTOA8MTQ0 251 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 THAP12O43422 761 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 GNA14O95837 355 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 RCAN1P53805 252 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 KLHL30Q0D2K2 578 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 DNAJC3Q13217 504 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 NR1I3Q14994 352 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 MAP3K21Q5TCX8 1036 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 RBM44Q6ZP01 1051 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 CELF1Q92879 486 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 MRPL1Q9BYD6 325 aaKnown RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 MCOLN1Q9GZU1 580 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 ARMC7Q9H6L4 198 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 PCDH18Q9HCL0 1135 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 AGPAT5Q9NUQ2 364 aa8.94□□□□□ -0.98
NDE1-202ENST00000396355 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
NDE1-202ENST00000396355 TRIM49BA6NDI0 452 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 AGRPO00253 132 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 SART1O43290 800 aaKnown RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 SEC24DO94855 1032 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 GSTA1P08263 222 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 IL17AQ16552 155 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 LONRF1Q17RB8 773 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 HAUS3Q68CZ6 603 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 CATSPER3Q86XQ3 398 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 AGGF1Q8N302 714 aaeCLIP8.93□□□□□ -0.98
NDE1-202ENST00000396355 ESR2Q92731 530 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 FAM84BQ96KN1 310 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 CNBD2Q96M20 576 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 TRIM51Q9BSJ1 452 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 THTPAQ9BU02 230 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 UBN1Q9NPG3 1134 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 CAPN6Q9Y6Q1 641 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 COMMD3-BMI1R4GMX3 469 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 XDHP47989 1333 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 A0A1B0GTH6 734 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 LIN7AO14910 233 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 ITGBL1O95965 494 aaPredicted RBP8.93□□□□□ -0.98
NDE1-202ENST00000396355 CA4P22748 312 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 S100A1P23297 94 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 TMEM266Q2M3C6 531 aa8.93□□□□□ -0.98
NDE1-202ENST00000396355 DAB2IPQ5VWQ8 1189 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms