RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 FNBP1Q96RU3 617 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 CRACR2AQ9BSW2 395 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 TMX1Q9H3N1 280 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 TANC1Q9C0D5 1861 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 NOL4O94818 638 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 C4BPAP04003 597 aaKnown RBP16.38■□□□□ 0.21
PTPN20-206ENST00000395722 AP3M2P53677 418 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 ZACNQ401N2 412 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 SV2AQ7L0J3 742 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 UBE2Q1Q7Z7E8 422 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 ACAP3Q96P50 834 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 CCDC94Q9BW85 323 aaPredicted RBP16.38■□□□□ 0.21
PTPN20-206ENST00000395722 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 ASB7Q9H672 318 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 SIX2Q9NPC8 291 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 GCNT4Q9P109 453 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 TBX21Q9UL17 535 aa16.38■□□□□ 0.21
PTPN20-206ENST00000395722 A0A1W2PQJ5 194 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 RBAK-RBAKDNI3L0D1 243 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 EPHB6O15197 1021 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 SLC9A1P19634 815 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 NFX1Q12986 1120 aaKnown RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 GPNMBQ14956 572 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 FAM43BQ6ZT52 329 aaPredicted RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 NECAB2Q7Z6G3 386 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 SMG8Q8ND04 991 aaKnown RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 LSM14BQ9BX40 385 aaKnown RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 GANQ9H2C0 597 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 NXF3Q9H4D5 531 aaKnown RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 MMRN2Q9H8L6 949 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 PLEKHA5Q9HAU0 1116 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 CAPN11Q9UMQ6 739 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 CITO14578 2027 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 LACTBL1A8MY62 500 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 RNF225M0QZC1 329 aaPredicted RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 FXR1P51114 621 aaKnown RBP eCLIP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 ARID5BQ14865 1188 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 TWF2Q6IBS0 349 aaKnown RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 TRIM65Q6PJ69 517 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 PPFIBP1Q86W92 1011 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 CD302Q8IX05 232 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 EFCAB13Q8IY85 973 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 EHBP1Q8NDI1 1231 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 OR5B17Q8NGF7 314 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 SNX27Q96L92 541 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 INTS2Q9H0H0 1204 aaKnown RBP16.37■□□□□ 0.21
PTPN20-206ENST00000395722 SNTG2Q9NY99 539 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 FBXL5Q9UKA1 691 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 IPPQ9Y573 584 aa16.37■□□□□ 0.21
PTPN20-206ENST00000395722 MGEA5O60502 916 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 PTMAP06454 111 aaKnown RBP16.36■□□□□ 0.21
PTPN20-206ENST00000395722 TNNI1P19237 187 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 CASP14P31944 242 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 CETN1Q12798 172 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 LRRC26Q2I0M4 334 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 HS1BP3Q53T59 392 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 XKR4Q5GH76 650 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 TDRD10Q5VZ19 366 aaKnown RBP16.36■□□□□ 0.21
PTPN20-206ENST00000395722 LMBRD2Q68DH5 695 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-206ENST00000395722 ALKAL1Q6UXT8 129 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 TC2NQ8N9U0 490 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 CCDC150Q8NCX0 1101 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 NEK11Q8NG66 645 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 FAM84AQ96KN4 292 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 PCMTD1Q96MG8 357 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-206ENST00000395722 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-206ENST00000395722 FAM207AQ9NSI2 230 aaPredicted RBP16.36■□□□□ 0.21
PTPN20-206ENST00000395722 FAM105AQ9NUU6 356 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 PCDHB2Q9Y5E7 798 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 BRCA2P51587 3418 aa16.36■□□□□ 0.21
PTPN20-206ENST00000395722 NBNO60934 754 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 MFAP3LO75121 409 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 ZNF623O75123 536 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 TRIM21P19474 475 aaKnown RBP16.35■□□□□ 0.21
PTPN20-206ENST00000395722 KLHDC7AQ5VTJ3 777 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 MRPL10Q7Z7H8 261 aaKnown RBP16.35■□□□□ 0.21
PTPN20-206ENST00000395722 NT5DC4Q86YG4 428 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 FBXL13Q8NEE6 735 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 TAS1R2Q8TE23 839 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 SEMA4DQ92854 862 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 HIPK3Q9H422 1215 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 C2CD2Q9Y426 696 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 DAAM1Q9Y4D1 1078 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 HES2Q9Y543 173 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 DNAH12Q6ZR08 3092 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 AKR1B15C9JRZ8 316 aaPredicted RBP16.35■□□□□ 0.21
PTPN20-206ENST00000395722 RECQL4O94761 1208 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 PARNO95453 639 aaKnown RBP16.35■□□□□ 0.21
PTPN20-206ENST00000395722 VNN1O95497 513 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 ACTN1P12814 892 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 ZSCAN20P17040 1043 aaPredicted RBP16.35■□□□□ 0.21
PTPN20-206ENST00000395722 RAB27AP51159 221 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 APBA1Q02410 837 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 DUOXA2Q1HG44 320 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 BAP1Q92560 729 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 WNT8AQ9H1J5 351 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 CEP72Q9P209 647 aa16.35■□□□□ 0.21
PTPN20-206ENST00000395722 CNTN3Q9P232 1028 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms