RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 ANGPTL2Q9UKU9 493 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 ARFGEF1Q9Y6D6 1849 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 BAZ2AQ9UIF9 1905 aaKnown RBP23.21■■□□□ 1.31
CLDND1-202ENST00000394180 GAKO14976 1311 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 C2CD2LO14523 706 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 ADAMTS3O15072 1205 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 ASLP04424 464 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 LMNB1P20700 586 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 INHBCP55103 352 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 EVX2Q03828 476 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 GRB10Q13322 594 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 SLC4A8Q2Y0W8 1093 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 MARK2Q7KZI7 788 aaKnown RBP23.21■■□□□ 1.31
CLDND1-202ENST00000394180 FAM163AQ96GL9 167 aaPredicted RBP23.21■■□□□ 1.31
CLDND1-202ENST00000394180 SLX1AQ9BQ83 275 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 CRNKL1Q9BZJ0 848 aaKnown RBP23.21■■□□□ 1.31
CLDND1-202ENST00000394180 VPS33BQ9H267 617 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 OCEL1Q9H607 264 aa23.21■■□□□ 1.31
CLDND1-202ENST00000394180 CYP2D7A0A087X1C5 515 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 MINDY4BA8MYZ0 360 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 RPL13P26373 211 aaKnown RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 MPP2Q14168 576 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 ST13P4Q8IZP2 240 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 SLC30A5Q8TAD4 765 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 JDP2Q8WYK2 163 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 RAD54LQ92698 747 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 SMC6Q96SB8 1091 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 CDH16O75309 829 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 ATP6V1G1O75348 118 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 FXR2P51116 673 aaKnown RBP eCLIP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 JAM2P57087 298 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 PPP4CP60510 307 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 CAV1Q03135 178 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 LONRF1Q17RB8 773 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 Q4G0T1 1027 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 KLC3Q6P597 504 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 CCDC174Q6PII3 467 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 RNF168Q8IYW5 571 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 C12orf50Q8NA57 414 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 MORC4Q8TE76 937 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 LENG1Q96BZ8 264 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 BTBD10Q9BSF8 475 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 CDC42EP4Q9H3Q1 356 aaKnown RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 DCP1AQ9NPI6 582 aaPredicted RBP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 PHTF1Q9UMS5 762 aa23.2■■□□□ 1.3
CLDND1-202ENST00000394180 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.2■■□□□ 1.3
CLDND1-202ENST00000394180 F8W8V4 182 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 RPL26P61254 145 aaKnown RBP23.19■■□□□ 1.3
CLDND1-202ENST00000394180 CXCL9Q07325 125 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 CALCOCO2Q13137 446 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 FRMD5Q7Z6J6 570 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 SLF2Q8IX21 1173 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 PRELID2Q8N945 189 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 GDAP1Q8TB36 358 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 TGFBRAP1Q8WUH2 860 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 C10orf82Q8WW14 230 aa23.19■■□□□ 1.3
CLDND1-202ENST00000394180 FAM47DPA6NHR8 397 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 CAPN9O14815 690 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 EDF1O60869 148 aaKnown RBP23.18■■□□□ 1.3
CLDND1-202ENST00000394180 TTC4O95801 387 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 IDO1P14902 403 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 FOXN2P32314 431 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 CLCN2P51788 898 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 GALCP54803 685 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 ITGB1BP2Q9UKP3 347 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 ASMTLO95671 621 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 CRKP46108 304 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 RHBDL3P58872 404 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 FKBP1AP62942 108 aaKnown RBP23.18■■□□□ 1.3
CLDND1-202ENST00000394180 KCNH2Q12809 1159 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 HS2ST1Q7LGA3 356 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 ARHGAP24Q8N264 748 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 UBL4BQ8N7F7 174 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 PIP4K2CQ8TBX8 421 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 STMN2Q93045 179 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 GFM2Q969S9 779 aaKnown RBP23.18■■□□□ 1.3
CLDND1-202ENST00000394180 TEKT1Q969V4 418 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 RAB34Q9BZG1 259 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 PPP1R9AQ9ULJ8 1098 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 SSX2IPQ9Y2D8 614 aa23.18■■□□□ 1.3
CLDND1-202ENST00000394180 PRPF4O43172 522 aaKnown RBP eCLIP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 STRNO43815 780 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 VIL1P09327 827 aaKnown RBP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 KRT13P13646 458 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 ITIH2P19823 946 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 WDR72Q3MJ13 1102 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 C11orf63Q6NUN7 778 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 RSBN1LQ6PCB5 846 aaPredicted RBP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 SYDE1Q6ZW31 735 aaPredicted RBP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 SLC35G2Q8TBE7 412 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 PPP2R3CQ969Q6 453 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 CATSPER2Q96P56 530 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 CCDC77Q9BR77 488 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 CYLDQ9NQC7 956 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 BARHL2Q9NY43 387 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 FRMPD4Q14CM0 1322 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 LTBP3Q9NS15 1303 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 GTPBP10A4D1E9 387 aaKnown RBP23.17■■□□□ 1.3
CLDND1-202ENST00000394180 USP17L12C9JPN9 530 aa23.17■■□□□ 1.3
CLDND1-202ENST00000394180 USP17L21D6R901 530 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms