RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNCB-202ENST00000393693 FNIP2Q9P278 1114 aa20.55■□□□□ 0.88
SNCB-202ENST00000393693 VPS13AQ96RL7 3174 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 POTEMA6NI47 508 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 LRRIQ4A6NIV6 560 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 TTLL13PA6NNM8 815 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 TADA2AO75478 443 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 PAPLNO95428 1278 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 UBE2HP62256 183 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 KLHL40Q2TBA0 621 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 RILPL1Q5EBL4 403 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 ADSSL1Q8N142 457 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 GPR152Q8TDT2 470 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 LEO1Q8WVC0 666 aaPredicted RBP20.54■□□□□ 0.88
SNCB-202ENST00000393693 MTMR9Q96QG7 549 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 PRKD2Q9BZL6 878 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 ZDHHC7Q9NXF8 308 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 NOL7Q9UMY1 257 aaKnown RBP20.54■□□□□ 0.88
SNCB-202ENST00000393693 USP20Q9Y2K6 914 aa20.54■□□□□ 0.88
SNCB-202ENST00000393693 TDRD15B5MCY1 1934 aaKnown RBP20.53■□□□□ 0.88
SNCB-202ENST00000393693 CASTOR2A6NHX0 329 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 NEMFO60524 1076 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 SRFP11831 508 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 LAMP2P13473 410 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 HSP90AA2PQ14568 343 aaPredicted RBP20.53■□□□□ 0.88
SNCB-202ENST00000393693 TMEM60Q9H2L4 133 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 TBC1D17Q9HA65 648 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 RCOR1Q9UKL0 485 aa20.53■□□□□ 0.88
SNCB-202ENST00000393693 ZMYND10O75800 440 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 YEATS4O95619 227 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 C1RP00736 705 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 SPATA31C1P0DKV0 1188 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 ATP2B1P20020 1258 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 RFX1P22670 979 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 STK38Q15208 465 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 GPR65Q8IYL9 337 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 USP28Q96RU2 1077 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 RPP25Q9BUL9 199 aaKnown RBP20.52■□□□□ 0.88
SNCB-202ENST00000393693 SNTG2Q9NY99 539 aa20.52■□□□□ 0.88
SNCB-202ENST00000393693 PTGESO14684 152 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 MED24O75448 989 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 KIF4AO95239 1232 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 XRCC6P12956 609 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNCB-202ENST00000393693 NTHL1P78549 312 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 TUSC3Q13454 348 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 HTR4Q13639 388 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 SF3A1Q15459 793 aaKnown RBP20.51■□□□□ 0.87
SNCB-202ENST00000393693 SPECC1Q5M775 1068 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 PPP4R3CPQ6ZMV5 832 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 GRASPQ7Z6J2 395 aaPredicted RBP20.51■□□□□ 0.87
SNCB-202ENST00000393693 CATSPER3Q86XQ3 398 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 CEP57Q86XR8 500 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 KCNG4Q8TDN1 519 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 BSNDQ8WZ55 320 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 NXPE3Q969Y0 559 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 CLSTN3Q9BQT9 956 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 FZD8Q9H461 694 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 PDZD7Q9H5P4 517 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 PRMT7Q9NVM4 692 aaPredicted RBP20.51■□□□□ 0.87
SNCB-202ENST00000393693 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.51■□□□□ 0.87
SNCB-202ENST00000393693 NUMBLQ9Y6R0 609 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 RIF1Q5UIP0 2472 aaKnown RBP20.51■□□□□ 0.87
SNCB-202ENST00000393693 MYH15Q9Y2K3 1946 aa20.51■□□□□ 0.87
SNCB-202ENST00000393693 ANHXE9PGG2 379 aa20.5■□□□□ 0.87
SNCB-202ENST00000393693 ADAM12O43184 909 aa20.5■□□□□ 0.87
SNCB-202ENST00000393693 EDN1P05305 212 aa20.5■□□□□ 0.87
SNCB-202ENST00000393693 DCNP07585 359 aaKnown RBP20.5■□□□□ 0.87
SNCB-202ENST00000393693 NASPP49321 788 aaPredicted RBP20.5■□□□□ 0.87
SNCB-202ENST00000393693 CEBPZQ03701 1054 aaKnown RBP20.5■□□□□ 0.87
SNCB-202ENST00000393693 FAM171A1Q5VUB5 890 aa20.5■□□□□ 0.87
SNCB-202ENST00000393693 CDCA2Q69YH5 1023 aaPredicted RBP20.5■□□□□ 0.87
SNCB-202ENST00000393693 LNX1Q8TBB1 728 aaPredicted RBP20.5■□□□□ 0.87
SNCB-202ENST00000393693 SYAP1Q96A49 352 aaPredicted RBP20.5■□□□□ 0.87
SNCB-202ENST00000393693 TTPALQ9BTX7 342 aa20.5■□□□□ 0.87
SNCB-202ENST00000393693 FBXW11Q9UKB1 542 aa20.5■□□□□ 0.87
SNCB-202ENST00000393693 SF3B1O75533 1304 aaKnown RBP eCLIP20.5■□□□□ 0.87
SNCB-202ENST00000393693 ZMYM2Q9UBW7 1377 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 DOCK8Q8NF50 2099 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 LIG1P18858 919 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 FSHRP23945 695 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 IGFBP6P24592 240 aaPredicted RBP20.49■□□□□ 0.87
SNCB-202ENST00000393693 CREMQ03060 361 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 ZBTB8OSQ8IWT0 167 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 PRIMPOLQ96LW4 560 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 POLD4Q9HCU8 107 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 ARHGEF3Q9NR81 526 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 R4GN57 208 aa20.49■□□□□ 0.87
SNCB-202ENST00000393693 SPTBN4Q9H254 2564 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 FAM186AA6NE01 2351 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 RECQL4O94761 1208 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 BMP15O95972 392 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 MCM7P33993 719 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 TRAPPC10P48553 1259 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 NAB2Q15742 525 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 PSMD5Q16401 504 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 FAM187BQ17R55 369 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 TMEM132AQ24JP5 1023 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 EEF1DP3Q658K8 133 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 PARM1Q6UWI2 310 aa20.48■□□□□ 0.87
SNCB-202ENST00000393693 MCPH1Q8NEM0 835 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms