RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 FNDC3AQ9Y2H6 1198 aaKnown RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 XRN1Q8IZH2 1706 aaKnown RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 NOP14P78316 857 aaKnown RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 TSNAXIP1Q2TAA8 658 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 FAM198AQ9UFP1 575 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 CDH6P55285 790 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 RHBDL3P58872 404 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 AP1B1Q10567 949 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 C18orf8Q96DM3 657 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 PRMT7Q9NVM4 692 aaPredicted RBP17.59■□□□□ 0.41
SCN3B-202ENST00000392770 TFR2Q9UP52 801 aa17.59■□□□□ 0.41
SCN3B-202ENST00000392770 PON1P27169 355 aa17.58■□□□□ 0.41
SCN3B-202ENST00000392770 MCEEQ96PE7 176 aa17.58■□□□□ 0.41
SCN3B-202ENST00000392770 KCNH4Q9UQ05 1017 aa17.58■□□□□ 0.41
SCN3B-202ENST00000392770 CASZ1Q86V15 1759 aa17.58■□□□□ 0.41
SCN3B-202ENST00000392770 ZBTB24O43167 697 aaPredicted RBP17.58■□□□□ 0.4
SCN3B-202ENST00000392770 ATMINO43313 823 aaPredicted RBP17.58■□□□□ 0.4
SCN3B-202ENST00000392770 CYTH3O43739 400 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 PLEKP08567 350 aaPredicted RBP17.58■□□□□ 0.4
SCN3B-202ENST00000392770 RGS7P49802 495 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 SULT1E1P49888 294 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 ERVK-24P63145 666 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 FBXO16Q8IX29 292 aaPredicted RBP17.58■□□□□ 0.4
SCN3B-202ENST00000392770 MCUQ8NE86 351 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 TMEM117Q9H0C3 514 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 DSG3P32926 999 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 ASPHQ12797 758 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 LMNTD2Q8IXW0 634 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 EFCAB13Q8IY85 973 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 TTC25Q96NG3 672 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 DNAJC7Q99615 494 aa17.58■□□□□ 0.4
SCN3B-202ENST00000392770 APOL1O14791 398 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 NPTXRO95502 500 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 CYP2C9P11712 490 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 CA4P22748 312 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 CPT1AP50416 773 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 HP1BP3Q5SSJ5 553 aaPredicted RBP17.57■□□□□ 0.4
SCN3B-202ENST00000392770 HEATR6Q6AI08 1181 aaKnown RBP17.57■□□□□ 0.4
SCN3B-202ENST00000392770 OPTNQ96CV9 577 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 NUDT12Q9BQG2 462 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 BCAR1P56945 870 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 CDKL3Q8IVW4 592 aaPredicted RBP17.57■□□□□ 0.4
SCN3B-202ENST00000392770 RCOR2Q8IZ40 523 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 A0A087X0B3 334 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 FAM86B1E9PN63 330 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 FAM86B2P0C5J1 330 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 PSMC6P62333 389 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 DCLK2Q8N568 766 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 CERS5Q8N5B7 392 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 DDNO94850 711 aaPredicted RBP17.57■□□□□ 0.4
SCN3B-202ENST00000392770 TMEM253P0C7T8 217 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 EPHB1P54762 984 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 VSNL1P62760 191 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 NAA25Q14CX7 972 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 MICAL1Q8TDZ2 1067 aa17.57■□□□□ 0.4
SCN3B-202ENST00000392770 COL14A1Q05707 1796 aaKnown RBP17.57■□□□□ 0.4
SCN3B-202ENST00000392770 WEE2P0C1S8 567 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 RCN2Q14257 317 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 SEZ6Q53EL9 994 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 IZUMO3Q5VZ72 239 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 LRRC31Q6UY01 552 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 SLC30A10Q6XR72 485 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 SMARCAL1Q9NZC9 954 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 BCAP29Q9UHQ4 241 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 H3BRJ5 948 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 VWA5AO00534 786 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 CASP4P49662 377 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 MAP7Q14244 749 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 SCFD1Q8WVM8 642 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 POLIQ9UNA4 740 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 NPTX2P47972 431 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 SPOPLQ6IQ16 392 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 RUBCNQ92622 972 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PHLPP1O60346 1717 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PI4K2BG5E9Z4 385 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 RPS6KA5O75582 802 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 RARBP10826 455 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 KPNA2P52292 529 aaKnown RBP17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PDIA2Q13087 525 aaKnown RBP17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PDCD2LQ9BRP1 358 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 FSD1LQ9BXM9 530 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PHF2O75151 1096 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 CPB1P15086 417 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 STILQ15468 1287 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PCDHB2Q9Y5E7 798 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 PCDHAC2Q9Y5I4 1007 aa17.56■□□□□ 0.4
SCN3B-202ENST00000392770 RRN3P2A6NIE6 340 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 RASA4BC9J798 803 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 AP5Z1O43299 807 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 RASA4O43374 803 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 ARSEP51690 589 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 PMS1P54277 932 aaKnown RBP17.55■□□□□ 0.4
SCN3B-202ENST00000392770 IRX4P78413 519 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 NUDCD1Q96RS6 583 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 VCXQ9H320 206 aa17.55■□□□□ 0.4
SCN3B-202ENST00000392770 MROH8Q9H579 483 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms