RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 CHRNA1P02708 482 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NR1D1P20393 614 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 COL9A1P20849 921 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PBX1P40424 430 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ATP1A2P50993 1020 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ADCY7P51828 1080 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 EXOSC10Q01780 885 aaKnown RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SP4Q02446 784 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 DYNC1I2Q13409 638 aaKnown RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GPM6BQ13491 265 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CEP55Q53EZ4 464 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NAALADL2Q58DX5 795 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZNF572Q7Z3I7 529 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CNGA4Q8IV77 575 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GSPT2Q8IYD1 628 aaKnown RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PIK3R5Q8WYR1 880 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CCT6BQ92526 530 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 C17orf80Q9BSJ5 609 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 C11orf84Q9BUA3 381 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 KCNH7Q9NS40 1196 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 HPSEQ9Y251 543 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CNTNAP5Q8WYK1 1306 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 GMNCA6NCL1 334 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SEC24CP53992 1094 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MRPS6P82932 125 aaKnown RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 COL19A1Q14993 1142 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FBXO47Q5MNV8 452 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 KRT40Q6A162 431 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZNF662Q6ZS27 426 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MYLK4Q86YV6 388 aaPredicted RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NSUN3Q9H649 340 aaKnown RBP12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 BARHL2Q9NY43 387 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 DACH1Q9UI36 760 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MTUS1Q9ULD2 1270 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ASB3Q9Y575 518 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PCDHA2Q9Y5H9 948 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 KDM3AQ9Y4C1 1321 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 COL1A2P08123 1366 aa12.3□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SMIM35A0A1B0GVV1 85 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ESYT2A0FGR8 921 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 E7EVH7 732 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SMIM24O75264 130 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ATG7O95352 703 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 VIMP08670 466 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 STAG3L1P0CL83 205 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SREBF1P36956 1147 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZNF268Q14587 947 aaPredicted RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 UBE2SQ16763 222 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SPRED3Q2MJR0 410 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 DNAJC14Q6Y2X3 702 aaPredicted RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 IQCKQ8N0W5 287 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ADGRA3Q8IWK6 1321 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MEIS1O00470 390 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZMYND10O75800 440 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CTDNEP1O95476 244 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MYL1P05976 194 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 RXRAP19793 462 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CCND1P24385 295 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 BMPR1AP36894 532 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 STAT5BP51692 787 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FUT2Q10981 343 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 LPIN1Q14693 890 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 LBRQ14739 615 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MARCH8Q5T0T0 291 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CMTR1Q8N1G2 835 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 FBXL16Q8N461 479 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TSEN2Q8NCE0 465 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CLP1Q92989 425 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 PABPC5Q96DU9 382 aaKnown RBP12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SEC16BQ96JE7 1060 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ZIM3Q96PE6 472 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ANO3Q9BYT9 981 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 TRPV2Q9Y5S1 764 aa12.29□□□□□ -0.44
TRAF3IP2-208ENST00000392556 UNC80Q8N2C7 3258 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SMCO2A6NFE2 343 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ENPP3O14638 875 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 INSRRP14616 1297 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SYKP43405 635 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CLK2P49760 499 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ACTR2P61160 394 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 DBN1Q16643 649 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NUGGCQ68CJ6 796 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 RUFY4Q6ZNE9 571 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 SPRED2Q7Z698 418 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CMTR2Q8IYT2 770 aaKnown RBP12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 MLKLQ8NB16 471 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 ACRBPQ8NEB7 543 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 NEK9Q8TD19 979 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 DNAJB3Q8WWF6 145 aa12.28□□□□□ -0.44
TRAF3IP2-208ENST00000392556 P2RX5Q93086 422 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms