RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 TDRD10Q5VZ19 366 aaKnown RBP23.03■■□□□ 1.28
SPHK1-202ENST00000392496 LMBRD2Q68DH5 695 aaPredicted RBP23.03■■□□□ 1.28
SPHK1-202ENST00000392496 H2AFVQ71UI9 128 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 ZNF710Q8N1W2 664 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 AGPAT1Q99943 283 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.03■■□□□ 1.28
SPHK1-202ENST00000392496 CPSF3Q9UKF6 684 aaKnown RBP23.03■■□□□ 1.28
SPHK1-202ENST00000392496 Q9Y3F1 56 aa23.03■■□□□ 1.28
SPHK1-202ENST00000392496 V9GYY5 206 aaPredicted RBP23.03■■□□□ 1.28
SPHK1-202ENST00000392496 PTPRJQ12913 1337 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 CA12O43570 354 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 CYP2C19P33261 490 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 WDR44Q5JSH3 913 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 MARCH8Q5T0T0 291 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 GLYCTKQ8IVS8 523 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 UBXN4Q92575 508 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 ZNF668Q96K58 619 aaPredicted RBP23.02■■□□□ 1.28
SPHK1-202ENST00000392496 MAP7D2Q96T17 732 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 MINDY3Q9H8M7 445 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 KAT6AQ92794 2004 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 MYH10P35580 1976 aa23.02■■□□□ 1.28
SPHK1-202ENST00000392496 A0A087WZ62 844 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 BUB1O43683 1085 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 F2P00734 622 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 NAP1L1P55209 391 aaKnown RBP23.01■■□□□ 1.27
SPHK1-202ENST00000392496 ERCC6LQ2NKX8 1250 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 TLK2Q86UE8 772 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 WDR49Q8IV35 697 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 TATDN2Q93075 761 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 FDXACB1Q9BRP7 624 aaPredicted RBP23.01■■□□□ 1.27
SPHK1-202ENST00000392496 C1orf112Q9NSG2 853 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 HDAC6Q9UBN7 1215 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 A0A0A6YYK5 440 aaPredicted RBP23.01■■□□□ 1.27
SPHK1-202ENST00000392496 ZEB2O60315 1214 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 VNN1O95497 513 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 PRLRP16471 622 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 TNFSF9P41273 254 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 PIK3CAP42336 1068 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 BIRC3Q13489 604 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 IFI16Q16666 785 aaKnown RBP23.01■■□□□ 1.27
SPHK1-202ENST00000392496 ZNF568Q3ZCX4 644 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 SEZ6Q53EL9 994 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 ZIC5Q96T25 663 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.01■■□□□ 1.27
SPHK1-202ENST00000392496 PCDHGC5Q9Y5F6 944 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 MGAMO43451 1857 aa23.01■■□□□ 1.27
SPHK1-202ENST00000392496 B4GALT5O43286 388 aa23■■□□□ 1.27
SPHK1-202ENST00000392496 TUBB4BP68371 445 aa23■■□□□ 1.27
SPHK1-202ENST00000392496 ELF2Q15723 593 aa23■■□□□ 1.27
SPHK1-202ENST00000392496 TMEM132AQ24JP5 1023 aa23■■□□□ 1.27
SPHK1-202ENST00000392496 RSRC2Q7L4I2 434 aaKnown RBP23■■□□□ 1.27
SPHK1-202ENST00000392496 PI4K2AQ9BTU6 479 aa23■■□□□ 1.27
SPHK1-202ENST00000392496 VTNP04004 478 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 IQCF3P0C7M6 154 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 USP8P40818 1118 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 CPT1AP50416 773 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 AMHR2Q16671 573 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 EEF1DP3Q658K8 133 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 ZNF410Q86VK4 478 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 GOLGA1Q92805 767 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 FAM84AQ96KN4 292 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 NRCAMQ92823 1304 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 CHMP4BP1P59074 171 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 KIAA0319LQ8IZA0 1049 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 OR5B17Q8NGF7 314 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 EPS8L1Q8TE68 723 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 SLC20A1Q8WUM9 679 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 KAT2BQ92831 832 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 AP5M1Q9H0R1 490 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 CDT1Q9H211 546 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 TSKSQ9UJT2 592 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 NOCTQ9UK39 431 aaKnown RBP22.99■■□□□ 1.27
SPHK1-202ENST00000392496 SNX12Q9UMY4 172 aa22.99■■□□□ 1.27
SPHK1-202ENST00000392496 CYP26A1O43174 497 aa22.98■■□□□ 1.27
SPHK1-202ENST00000392496 SGPL1O95470 568 aa22.98■■□□□ 1.27
SPHK1-202ENST00000392496 TMEM253P0C7T8 217 aa22.98■■□□□ 1.27
SPHK1-202ENST00000392496 GALCP54803 685 aa22.98■■□□□ 1.27
SPHK1-202ENST00000392496 CDC42EP1Q00587 391 aa22.98■■□□□ 1.27
SPHK1-202ENST00000392496 SETD4Q9NVD3 440 aa22.98■■□□□ 1.27
SPHK1-202ENST00000392496 PALMO75781 387 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 SMIM10L2AP0DMW4 78 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 SMIM10L2BP0DMW5 78 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 MCF2P10911 925 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 CTGFP29279 349 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 POU5F1Q01860 360 aaKnown RBP22.97■■□□□ 1.27
SPHK1-202ENST00000392496 RPUSD2Q8IZ73 545 aaKnown RBP22.97■■□□□ 1.27
SPHK1-202ENST00000392496 LMBR1Q8WVP7 490 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 NLRP7Q8WX94 980 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 PUF60Q9UHX1 559 aaKnown RBP22.97■■□□□ 1.27
SPHK1-202ENST00000392496 HYOU1Q9Y4L1 999 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 NCANO14594 1321 aa22.97■■□□□ 1.27
SPHK1-202ENST00000392496 CTAGE15A4D2H0 777 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 PHACTR2O75167 634 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 CTAGE8P0CG41 777 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 FCGRTP55899 365 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 NFRKBQ6P4R8 1299 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 NOP9Q86U38 636 aaKnown RBP22.96■■□□□ 1.27
SPHK1-202ENST00000392496 CTAGE6Q86UF2 777 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 CTAGE4Q8IX94 777 aa22.96■■□□□ 1.27
SPHK1-202ENST00000392496 THNSL1Q8IYQ7 743 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms