RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 FAM170AA1A519 330 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 UNCXA6NJT0 531 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 DDX3YO15523 660 aaKnown RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 MSCO60682 206 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 MTA2O94776 668 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 GLI1P08151 1106 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 TXNP10599 105 aaKnown RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 CYP2C8P10632 490 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 FAM193AP78312 1265 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 LAMTOR4Q0VGL1 99 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 ZBTB41Q5SVQ8 909 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 CDCA2Q69YH5 1023 aaPredicted RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 CCDC113Q9H0I3 377 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 EFCC1Q9HA90 598 aa20.54■□□□□ 0.88
ERCC2-203ENST00000391944 TTC7AQ9ULT0 858 aaPredicted RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 NOC2LQ9Y3T9 749 aaKnown RBP20.54■□□□□ 0.88
ERCC2-203ENST00000391944 A0A0U1RQG5 324 aaPredicted RBP20.53■□□□□ 0.88
ERCC2-203ENST00000391944 CLDN3O15551 220 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 GRIN3BO60391 1043 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 VNN1O95497 513 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 TTLL4Q14679 1199 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 C11orf63Q6NUN7 778 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 PNMA8AQ86V59 439 aaPredicted RBP20.53■□□□□ 0.88
ERCC2-203ENST00000391944 COPS5Q92905 334 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 SMARCAD1Q9H4L7 1026 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 HPCAL4Q9UM19 191 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 ALG6Q9Y672 507 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 CNTNAP2Q9UHC6 1331 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 HEXIM1O94992 359 aaKnown RBP20.53■□□□□ 0.88
ERCC2-203ENST00000391944 KRT5P13647 590 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 CGRRF1Q99675 332 aa20.53■□□□□ 0.88
ERCC2-203ENST00000391944 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
ERCC2-203ENST00000391944 PIK3CAP42336 1068 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 EPHB4P54760 987 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 BIRC3Q13489 604 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 TMEM63BQ5T3F8 832 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 GPRC5AQ8NFJ5 357 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 GDAP1L1Q96MZ0 367 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 JPH2Q9BR39 696 aaPredicted RBP20.52■□□□□ 0.88
ERCC2-203ENST00000391944 CARD9Q9H257 536 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 PDGFCQ9NRA1 345 aa20.52■□□□□ 0.88
ERCC2-203ENST00000391944 TTLL13PA6NNM8 815 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 CCDC188H7C350 402 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 TOM1L1O75674 476 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 SRGAP2CP0DJJ0 459 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 AARSP49588 968 aaKnown RBP eCLIP20.52■□□□□ 0.87
ERCC2-203ENST00000391944 EMBQ6PCB8 327 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 LRRC71Q8N4P6 559 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 UBE2Q2Q8WVN8 375 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 EPB41L5Q9HCM4 733 aa20.52■□□□□ 0.87
ERCC2-203ENST00000391944 CYP1A2P05177 515 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 CCNA1P78396 465 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 GUCY2DQ02846 1103 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 ACAD10Q6JQN1 1059 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 ZBTB8OSQ8IWT0 167 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 KLHL7Q8IXQ5 586 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 RNF149Q8NC42 400 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 ACO2Q99798 780 aaKnown RBP20.51■□□□□ 0.87
ERCC2-203ENST00000391944 MED4Q9NPJ6 270 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 GTF3C4Q9UKN8 822 aa20.51■□□□□ 0.87
ERCC2-203ENST00000391944 KRIT1O00522 736 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 RAD51CO43502 376 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 FAM189A1O60320 539 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 HBP1O60381 514 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 BPIFB4P59827 614 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 DMTNQ08495 405 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 ARMCX2Q7L311 632 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 RPS6KC1Q96S38 1066 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 AP1M1Q9BXS5 423 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 C2orf40Q9H1Z8 148 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 PCDHB2Q9Y5E7 798 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 MIF4GDA9UHW6 222 aaKnown RBP20.5■□□□□ 0.87
ERCC2-203ENST00000391944 MAPK6Q16659 721 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 CLEC16AQ2KHT3 1053 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 ZNF792Q3KQV3 632 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 DCAF12L1Q5VU92 463 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 SND1Q7KZF4 910 aaKnown RBP eCLIP20.5■□□□□ 0.87
ERCC2-203ENST00000391944 ZNF677Q86XU0 584 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 BRSK2Q8IWQ3 736 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 CAVIN3Q969G5 261 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 SLC45A1Q9Y2W3 748 aa20.5■□□□□ 0.87
ERCC2-203ENST00000391944 PRKCBP05771 671 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 CARSP49589 748 aaKnown RBP20.49■□□□□ 0.87
ERCC2-203ENST00000391944 SEZ6Q53EL9 994 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 HSP90B2PQ58FF3 399 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 SPOPLQ6IQ16 392 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 OR5B17Q8NGF7 314 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 CCDC102AQ96A19 550 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 MS4A4AQ96JQ5 239 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 TCHPQ9BT92 498 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 TRPC6Q9Y210 931 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 ZSCAN5CA6NGD5 496 aaPredicted RBP20.49■□□□□ 0.87
ERCC2-203ENST00000391944 PDHXO00330 501 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 SART1O43290 800 aaKnown RBP20.49■□□□□ 0.87
ERCC2-203ENST00000391944 CETPP11597 493 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 HARSP12081 509 aaKnown RBP20.49■□□□□ 0.87
ERCC2-203ENST00000391944 ACO1P21399 889 aaKnown RBP20.49■□□□□ 0.87
ERCC2-203ENST00000391944 AP3M2P53677 418 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 GRM1Q13255 1194 aa20.49■□□□□ 0.87
ERCC2-203ENST00000391944 CUL2Q13617 745 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms