RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 ALG13Q9NP73 1137 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 BSDC1Q9NW68 430 aaPredicted RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 WDR47O94967 919 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 CIITAP33076 1130 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 EIF3EP60228 445 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 RBM43Q6ZSC3 357 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 HORMAD1Q86X24 394 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 CASKIN2Q8WXE0 1202 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 ARHGEF40Q8TER5 1519 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 SCP2P22307 547 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 MAGEA4P43358 317 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 ZC3H12BQ5HYM0 836 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PAPD7Q5XG87 772 aaKnown RBP18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 PCYOX1LQ8NBM8 494 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 RNF139Q8WU17 664 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 SH3GL2Q99962 352 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 RHBDL2Q9NX52 303 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDYLQ9Y232 598 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDC26Q8NHZ8 85 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 DNAJC7Q99615 494 aa18.01■□□□□ 0.47
COL4A3BP-203ENST00000380494 XPAP23025 273 aaPredicted RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 PTK7Q13308 1070 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 RCN1Q15293 331 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 COPG1Q9Y678 874 aaKnown RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 BCORL1Q5H9F3 1711 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 GPC3P51654 580 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 FASTKD1Q53R41 847 aaKnown RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 C4orf33Q8N1A6 199 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 PABPC3Q9H361 631 aaKnown RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 DTNAQ9Y4J8 743 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 EMSYQ7Z589 1322 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 FNTAP49354 379 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 POU5F1BQ06416 359 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 GIMAP8Q8ND71 665 aaPredicted RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 CYGBQ8WWM9 190 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 CNBD2Q96M20 576 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 TIPINQ9BVW5 301 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 TRIM45Q9H8W5 580 aaPredicted RBP18■□□□□ 0.47
COL4A3BP-203ENST00000380494 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 USP17L5A8MUK1 530 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 GNAT1P11488 350 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 KCNQ4P56696 695 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 GPD1LQ8N335 351 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 ERGIC2Q96RQ1 377 aa18■□□□□ 0.47
COL4A3BP-203ENST00000380494 KIAA0391O15091 583 aaKnown RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 SLC4A1P02730 911 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 UCHL3P15374 230 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 SFNP31947 248 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 TRIM16LQ309B1 348 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 AASDHQ4L235 1098 aaPredicted RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 ENGASEQ8NFI3 743 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 ANKS1AQ92625 1134 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 ARHGEF26Q96DR7 871 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PAPOLBQ9NRJ5 636 aaKnown RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDY2AQ9Y6F7 541 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDY1Q9Y6F8 540 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PJA2O43164 708 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDK17Q00537 523 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 OLA1Q9NTK5 396 aaKnown RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 NSMCE4AQ9NXX6 385 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 INPP5FQ9Y2H2 1132 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 CLDN3O15551 220 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 HOXA13P31271 388 aaPredicted RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 TMEM179Q6ZVK1 233 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 ANKARQ7Z5J8 1434 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 CDR2LQ86X02 465 aaPredicted RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 ADGRA3Q8IWK6 1321 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 DDIASQ8IXT1 998 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 NDUFAF2Q8N183 169 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 FAM167AQ96KS9 214 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 MROH7-TTC4A0A0A0MT08 1334 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 M0R3G1 203 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PSMD3O43242 534 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PRAMEP78395 509 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 RWDD4Q6NW29 188 aaKnown RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 GPR141Q7Z602 305 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 STX19Q8N4C7 294 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 PRPF18Q99633 342 aaKnown RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 SENP7Q9BQF6 1050 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 FAM213AQ9BRX8 229 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 TUFT1Q9NNX1 390 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 STAP1Q9ULZ2 295 aa17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.99■□□□□ 0.47
COL4A3BP-203ENST00000380494 M0QYV0 167 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 SNRPAP09012 282 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 TARSP26639 723 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 HADHAP40939 763 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 COPAP53621 1224 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 IFT43Q96FT9 208 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 H3BQF6 201 aa17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 GEMIN4P57678 1058 aaKnown RBP17.98■□□□□ 0.47
COL4A3BP-203ENST00000380494 DOK7Q18PE1 504 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms