RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 MMEP08473 750 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 ZNF677Q86XU0 584 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 MREGQ8N565 214 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 DHX38Q92620 1227 aaKnown RBP13.55□□□□□ -0.24
VPS16-202ENST00000380445 CEP89Q96ST8 783 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 PCDHB18PQ96TA0 734 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 FAM204AQ9H8W3 233 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.55□□□□□ -0.241e-9■■■■■ 76.9
VPS16-202ENST00000380445 GTF3C4Q9UKN8 822 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 GOLGA8KD6RF30 607 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 AGPSO00116 658 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 GGPS1O95749 300 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 KRT5P13647 590 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 HSPA6P17066 643 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 EFNA5P52803 228 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 ZACNQ401N2 412 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 CASKIN2Q8WXE0 1202 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 RNPC3Q96LT9 517 aaKnown RBP13.55□□□□□ -0.24
VPS16-202ENST00000380445 MSTO1Q9BUK6 570 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 WNT8AQ9H1J5 351 aa13.55□□□□□ -0.24
VPS16-202ENST00000380445 MAFO75444 373 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 OSBPP22059 807 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 TCF7P36402 384 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 PPFIA1Q13136 1202 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ACAD10Q6JQN1 1059 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 FASTKD5Q7L8L6 764 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 TCP11Q8WWU5 503 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 TATDN2Q93075 761 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 PCYT2Q99447 389 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 FHDC1Q9C0D6 1143 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 RBAKQ9NYW8 714 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 KCNH4Q9UQ05 1017 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 PAPPA2Q9BXP8 1791 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 A0A0B4J269 797 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ESYT3A0FGR9 886 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ADCY3O60266 1144 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 C4BPAP04003 597 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 CYP1A2P05177 515 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 PPIL2Q13356 520 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 TTLL12Q14166 644 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 PCDHB2Q9Y5E7 798 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 OTOFQ9HC10 1997 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ZSCAN5CA6NGD5 496 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 PIK3CAP42336 1068 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ACOT2P49753 483 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 NLRP11P59045 1033 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 BIRC3Q13489 604 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS16-202ENST00000380445 KCTD2Q14681 263 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 IER5Q5VY09 327 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 DLK2Q6UY11 383 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ZPBP2Q6X784 338 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ZNF564Q8TBZ8 553 aaPredicted RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 ZC3H15Q8WU90 426 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 DDX1Q92499 740 aaKnown RBP13.54□□□□□ -0.24
VPS16-202ENST00000380445 ZNF516Q92618 1163 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 ZNF653Q96CK0 615 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 TRIM11Q96F44 468 aa13.54□□□□□ -0.24
VPS16-202ENST00000380445 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
VPS16-202ENST00000380445 PEX10O60683 326 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 HLA-DRAP01903 254 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 AP3M2P53677 418 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 MXD4Q14582 209 aaPredicted RBP13.53□□□□□ -0.24
VPS16-202ENST00000380445 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 LEKR1Q6ZMV7 388 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 USP50Q70EL3 339 aaPredicted RBP13.53□□□□□ -0.24
VPS16-202ENST00000380445 SRLQ86TD4 932 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 GPATCH11Q8N954 259 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 RIN2Q8WYP3 895 aaPredicted RBP13.53□□□□□ -0.24
VPS16-202ENST00000380445 SH3GL2Q99962 352 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 JPH2Q9BR39 696 aaPredicted RBP13.53□□□□□ -0.24
VPS16-202ENST00000380445 NUP85Q9BW27 656 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 TARS2Q9BW92 718 aaKnown RBP13.53□□□□□ -0.24
VPS16-202ENST00000380445 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 CNMDO75829 334 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 PTENP60484 403 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 MESDQ14696 234 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 DPY19L2Q6NUT2 758 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 GLG1Q92896 1179 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 LRRC45Q96CN5 670 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 CGRRF1Q99675 332 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 ZSWIM1Q9BR11 485 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 PI4K2AQ9BTU6 479 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 MROH8Q9H579 483 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 FAM114A2Q9NRY5 505 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 ANKFY1Q9P2R3 1169 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 AMACRQ9UHK6 382 aa13.53□□□□□ -0.24
VPS16-202ENST00000380445 GOLGA6CA6NDK9 693 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 BHMG1C9JSJ3 638 aaPredicted RBP13.52□□□□□ -0.24
VPS16-202ENST00000380445 CLDN3O15551 220 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 GOLGA6DP0CG33 693 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 MYBL1P10243 752 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 TBXAS1P24557 533 aaPredicted RBP13.52□□□□□ -0.24
VPS16-202ENST00000380445 ERVK-9P63128 1117 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 CAPSQ13938 189 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 LY6KQ17RY6 165 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 CLEC16AQ2KHT3 1053 aa13.52□□□□□ -0.24
VPS16-202ENST00000380445 SEL1L2Q5TEA6 688 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms