RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 INTS8Q75QN2 995 aaKnown RBP7.96□□□□□ -1.13
CDKL5-201ENST00000379989 NELFCDQ8IXH7 590 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 MGARPQ8TDB4 240 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 HGH1Q9BTY7 390 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 TLE6Q9H808 572 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 MAGEF1Q9HAY2 307 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.96□□□□□ -1.13
CDKL5-201ENST00000379989 STX18Q9P2W9 335 aaKnown RBP7.96□□□□□ -1.13
CDKL5-201ENST00000379989 RWDD2AQ9UIY3 292 aa7.96□□□□□ -1.13
CDKL5-201ENST00000379989 MYH11P35749 1972 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 TRIM64CA6NLI5 447 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 RGS16O15492 202 aaPredicted RBP7.96□□□□□ -1.14
CDKL5-201ENST00000379989 OPHN1O60890 802 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 FGFR1OPO95684 399 aaKnown RBP7.96□□□□□ -1.14
CDKL5-201ENST00000379989 ZBED1O96006 694 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 NUDT17P0C025 328 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 PCSK6P29122 969 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 KIF11P52732 1056 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 SEPT7Q16181 437 aaKnown RBP7.96□□□□□ -1.14
CDKL5-201ENST00000379989 ZNF449Q6P9G9 518 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 KLHDC10Q6PID8 442 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 CCDC174Q6PII3 467 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 HHIPL2Q6UWX4 724 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 IZUMO2Q6UXV1 221 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 RBM44Q6ZP01 1051 aaKnown RBP7.96□□□□□ -1.14
CDKL5-201ENST00000379989 TMTC3Q6ZXV5 915 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 ARHGAP24Q8N264 748 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 GFM2Q969S9 779 aaKnown RBP7.96□□□□□ -1.14
CDKL5-201ENST00000379989 AKT1S1Q96B36 256 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 NSMCE3Q96MG7 304 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 GSDMAQ96QA5 445 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 NDUFA13Q9P0J0 144 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 ARHGAP20Q9P2F6 1191 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 PACSIN2Q9UNF0 486 aaPredicted RBP7.96□□□□□ -1.14
CDKL5-201ENST00000379989 CHKBQ9Y259 395 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 ANKRD31Q8N7Z5 1873 aa7.96□□□□□ -1.14
CDKL5-201ENST00000379989 SH3PXD2BA1X283 911 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TRAFD1O14545 582 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PJA2O43164 708 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 FBXO21O94952 628 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 AGTP01019 485 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CPA3P15088 417 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 KRT2P35908 639 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PPP1R2P41236 205 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 KCNMA1Q12791 1236 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CTC1Q2NKJ3 1217 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PPP1R18Q6NYC8 613 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 UNC13DQ70J99 1090 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SPATA17Q96L03 361 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 MIPEPQ99797 713 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CEP44Q9C0F1 390 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 METTL14Q9HCE5 456 aaKnown RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CD209Q9NNX6 404 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 ZNF212Q9UDV6 495 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SRP68Q9UHB9 627 aaKnown RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CDK5RAP2Q96SN8 1893 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TTLL13PA6NNM8 815 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SPECC1L-ADORA2AF8WAN1 911 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CBX6O95503 412 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 EYA4O95677 639 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 FTCDO95954 541 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PIM1P11309 404 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TROAPQ12815 778 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PAK1Q13153 545 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PPP2R5CQ13362 524 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CYTH1Q15438 398 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TGFBIQ15582 683 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CCSAPQ6IQ19 270 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TYW1BQ6NUM6 668 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 C1orf228Q6PIY5 440 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TTC39CQ8N584 583 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PRPF31Q8WWY3 499 aaKnown RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PAGE5Q96GU1 130 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 MASTLQ96GX5 879 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 GPR101Q96P66 508 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 NOX5Q96PH1 765 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PHF20Q9BVI0 1012 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CLK4Q9HAZ1 481 aaKnown RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SEL1LQ9UBV2 794 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SRPRBQ9Y5M8 271 aaKnown RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 ESYT2A0FGR8 921 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 FAM196BA6NMK8 535 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 CCDC169A6NNP5 214 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 DSG1Q02413 1049 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 GRM2Q14416 872 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 LPIN1Q14693 890 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 GRM4Q14833 912 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 TXNRD1Q16881 649 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SPDYCQ5MJ68 293 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SYCP2LQ5T4T6 812 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 SNRNP48Q6IEG0 339 aaKnown RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 PODNQ7Z5L7 613 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 COL23A1Q86Y22 540 aaPredicted RBP7.95□□□□□ -1.14
CDKL5-201ENST00000379989 LRRC49Q8IUZ0 686 aa7.95□□□□□ -1.14
CDKL5-201ENST00000379989 ENAHQ8N8S7 591 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms